Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2126

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2125: 10493 - BLAST BA75_02480T0 [Komagataella pastoris], at 129988 to 130716 10493 mRNA_2126: 10494 - Hypothetical Protein, at 130943 to 133180 10494 mRNA_2127: 10495 - BLAST putative lipase ATG15 [Grifola frondosa], at 133530 to 135409 10495

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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130,067 - 10493 mRNA_2125 0.11 2.1
130,067 - 10493 mRNA_2125 0.11 1.4
130,114 + 10493 mRNA_2125 0.17 -0.8
130,133 + 10493 mRNA_2125 0.20 0.3
130,209 - 10493 mRNA_2125 0.30 -0.5
130,325 + 10493 mRNA_2125 0.46 -0.8
130,366 - 10493 mRNA_2125 0.52 -1.0
130,486 - 10493 mRNA_2125 0.68 -0.3
130,655 + -0.9
130,813 + -2.0
130,824 + -0.9
130,831 - 0.4
130,835 + 0.0
130,950 - -0.3
131,123 + 1.0
131,469 + 10494 mRNA_2126 0.24 0.3
131,590 + 10494 mRNA_2126 0.29 -1.1
131,653 - 10494 mRNA_2126 0.32 -1.2
132,136 - 10494 mRNA_2126 0.53 0.4
132,535 - 10494 mRNA_2126 0.71 -0.0
132,853 + 10494 mRNA_2126 0.85 1.0
133,104 + -1.7
133,114 - 0.4
133,286 + -1.7
133,451 - -1.2
133,453 + 0.2
133,735 + 10495 mRNA_2127 0.11 0.1
133,743 + 10495 mRNA_2127 0.11 -1.2
133,847 + 10495 mRNA_2127 0.17 -0.5
133,883 - 10495 mRNA_2127 0.19 -1.5