Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2070

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2069: 10437 - K03039 PSMD13, RPN9 26S proteasome regulatory subunit N9, at 1235 to 2339 10437 mRNA_2070: 10438 - Hypothetical Protein, at 2600 to 2887 10438 mRNA_2071: 10439 - HMMPfam-Chromate transporter-PF02417, at 3478 to 5448 10439

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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2,482 + 0.7
2,499 - 0.8
2,500 + 0.3
2,502 + 0.8
2,508 + 0.1
2,512 - -0.9
2,513 + 0.1
2,514 - 0.4
2,521 - -0.1
2,522 + -1.5
2,523 - -0.2
2,523 - 0.1
2,638 - 10438 mRNA_2070 0.13 0.6
2,667 + 10438 mRNA_2070 0.23 1.7
2,670 - 10438 mRNA_2070 0.24 -0.0
2,763 - 10438 mRNA_2070 0.57 1.4
2,780 - 10438 mRNA_2070 0.62 0.8
2,798 - 10438 mRNA_2070 0.69 0.3
2,805 - 10438 mRNA_2070 0.71 -1.7
2,811 + 10438 mRNA_2070 0.73 0.3
3,039 - 0.1
3,248 + 0.5
3,318 - 0.2
3,366 + 0.2
3,378 - 1.4
3,380 - 0.5