Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2067

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2066: 10434 - SUPERFAMILY--SSF52047, at 867605 to 868583 10434 mRNA_2067: 10435 - BLAST cell morphogenesis protein [Grosmannia clavigera ..., at 868963 to 869751 10435 mRNA_2068: 10436 - Hypothetical Protein, at 869923 to 870194 10436

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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867,991 - 10434 mRNA_2066 0.39 -1.5
868,059 - 10434 mRNA_2066 0.46 0.8
868,066 + 10434 mRNA_2066 0.47 2.0
868,214 + 10434 mRNA_2066 0.62 -0.2
868,253 - 10434 mRNA_2066 0.66 -0.4
868,298 - 10434 mRNA_2066 0.71 -1.1
868,342 - 10434 mRNA_2066 0.75 1.7
868,390 - 10434 mRNA_2066 0.80 -1.8
868,493 - 0.7
868,501 + 0.2
868,534 + -5.4
868,534 + -0.4
868,555 - 1.0
868,625 - 0.1
868,626 - 0.8
868,645 - 1.1
868,712 - 0.1
868,813 - -1.2
868,875 - 0.3
868,932 - 0.2
868,957 - 0.4
868,974 + 1.5
868,980 - 0.1
868,983 - 0.4
869,027 - -1.2
869,097 + 10435 mRNA_2067 0.17 -0.7
869,174 + 10435 mRNA_2067 0.27 1.3
869,210 - 10435 mRNA_2067 0.31 -0.6
869,232 + 10435 mRNA_2067 0.34 1.3
869,239 - 10435 mRNA_2067 0.35 -0.3
869,248 - 10435 mRNA_2067 0.36 -0.1
869,360 - 10435 mRNA_2067 0.50 0.4
869,379 - 10435 mRNA_2067 0.53 0.8
869,379 - 10435 mRNA_2067 0.53 0.9
869,385 + 10435 mRNA_2067 0.53 0.8
869,405 - 10435 mRNA_2067 0.56 -0.5
869,405 - 10435 mRNA_2067 0.56 -0.8
869,406 + 10435 mRNA_2067 0.56 1.6
869,493 - 10435 mRNA_2067 0.67 0.5
869,524 - 10435 mRNA_2067 0.71 0.4
869,540 - 10435 mRNA_2067 0.73 -0.9
869,591 - 10435 mRNA_2067 0.80 2.1
869,620 - 10435 mRNA_2067 0.83 0.2
869,624 - 10435 mRNA_2067 0.84 -0.2
869,629 - 10435 mRNA_2067 0.84 -0.1
869,641 - 10435 mRNA_2067 0.86 -1.7
869,651 - 10435 mRNA_2067 0.87 0.5
869,689 - 1.4
869,714 + -0.6
869,721 - -1.1
869,758 - -1.1
869,758 + -0.2
869,771 - 0.0
869,775 - -0.6
869,795 - -0.2
869,864 - -1.7
869,866 - 0.4
869,877 - 0.7
869,881 - 0.6
869,903 - 0.5
869,904 - -0.4
869,908 - 0.8
869,923 - 0.4
869,942 - -0.3
869,943 - -1.0
869,948 - -0.5
869,964 + 10436 mRNA_2068 0.15 -0.2
869,966 - 10436 mRNA_2068 0.16 -0.9
869,990 + 10436 mRNA_2068 0.25 -1.3
869,990 + 10436 mRNA_2068 0.25 -0.1
869,990 - 10436 mRNA_2068 0.25 -1.2
870,004 - 10436 mRNA_2068 0.30 1.4
870,012 + 10436 mRNA_2068 0.33 -0.2
870,033 - 10436 mRNA_2068 0.40 0.8
870,035 - 10436 mRNA_2068 0.41 -0.3
870,042 - 10436 mRNA_2068 0.44 0.7
870,044 + 10436 mRNA_2068 0.44 -0.4
870,054 + 10436 mRNA_2068 0.48 -1.2
870,056 - 10436 mRNA_2068 0.49 0.4
870,058 - 10436 mRNA_2068 0.50 0.7
870,061 - 10436 mRNA_2068 0.51 -0.9
870,070 - 10436 mRNA_2068 0.54 -1.1
870,086 - 10436 mRNA_2068 0.60 -1.2
870,086 - 10436 mRNA_2068 0.60 -0.2
870,093 + 10436 mRNA_2068 0.62 2.4
870,107 - 10436 mRNA_2068 0.68 -0.3
870,112 + 10436 mRNA_2068 0.69 0.1
870,127 - 10436 mRNA_2068 0.75 2.7
870,145 - 10436 mRNA_2068 0.82 -0.1
870,148 - 10436 mRNA_2068 0.83 0.6
870,158 - 10436 mRNA_2068 0.86 -0.0
870,171 + -1.8
870,172 - -1.4
870,172 - 0.4
870,172 - -0.2
870,172 - -3.1
870,173 + -0.2
870,173 + 1.2
870,176 - 0.2
870,180 - 0.2
870,192 - -0.0
870,205 - 0.8
870,210 - 0.6
870,210 - 0.4
870,210 - -0.4
870,210 - -1.1
870,210 - 0.7