Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1996

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1995: 10363 - KOG0062 ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b, at 699690 to 700377 10363 mRNA_1996: 10364 - KOG0379 Kelch repeat-containing proteins, at 700597 to 701909 10364 mRNA_1997: 10365 - KOG0627 Heat shock transcription factor, at 702510 to 703691 10365

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
699,707 + 0.6
699,843 - 10363 mRNA_1995 0.22 -0.2
699,942 - 10363 mRNA_1995 0.37 -0.0
700,004 + 10363 mRNA_1995 0.46 -0.3
700,441 + 0.5
700,476 + 0.7
700,538 + -0.9
700,745 - 10364 mRNA_1996 0.11 -1.2
701,029 - 10364 mRNA_1996 0.33 -1.1
701,042 - 10364 mRNA_1996 0.34 0.7
701,185 + 10364 mRNA_1996 0.45 0.8
701,454 + 10364 mRNA_1996 0.65 -0.1
701,862 - -0.6
701,888 - -1.3
701,905 - 0.5
701,921 + 1.0
701,926 + -0.7
701,961 - -0.9
701,988 + -0.4
702,084 - -1.1
702,089 - -1.0
702,091 + -0.5
702,234 - -0.0
702,236 - 0.7
702,243 - -2.1
702,274 + -0.3
702,282 + -0.6
702,309 - -0.1
702,333 - -0.6
702,341 - 0.3
702,354 + 1.5
702,364 + -3.2
702,365 - -0.4
702,368 + -0.2
702,380 + -0.6
702,384 + -1.1
702,408 + -1.3
702,481 + -1.9
702,500 - -0.4