Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1961

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1960: 10328 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 613593 to 615935 10328 mRNA_1961: 10329 - HMMPfam-CUE domain-PF02845,ProSiteProfiles-CUE domain profile.-PS51140, at 616368 to 617254 10329 mRNA_1962: 10330 - K00133 asd aspartate-semialdehyde dehydrogenase, at 617594 to 618818 10330

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
615,546 - 10328 mRNA_1960 0.83 -0.3
615,671 + 10328 mRNA_1960 0.89 -2.5
615,691 + 10328 mRNA_1960 0.90 -0.7
615,973 + 0.3
616,087 - -0.2
616,101 + -0.4
616,108 + -1.2
616,379 + -1.1
616,380 - 0.6
616,383 - -0.9
616,389 - 0.5
616,398 - 0.2
616,406 + -1.7
616,433 - -0.9
616,532 + 10329 mRNA_1961 0.18 -2.1
616,691 - 10329 mRNA_1961 0.36 -1.9