Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1949

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1948: 10316 - K08176 PHO84 MFS transporter, PHS family, inorganic phosphate transporter, at 580409 to 582858 10316 mRNA_1949: 10317 - KOG0254 Predicted transporter (major facilitator superfamily), at 583350 to 585589 10317

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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582,858 + -0.3
582,866 + 0.5
582,871 - -0.8
582,882 + 1.3
583,075 + 0.0
583,127 - 0.7
583,402 + 0.4
583,847 + 10317 mRNA_1949 0.22 -1.5
584,446 - 10317 mRNA_1949 0.49 0.3
585,015 + 10317 mRNA_1949 0.74 -0.3
585,282 + 10317 mRNA_1949 0.86 1.2
585,282 + 10317 mRNA_1949 0.86 0.3
585,283 - 10317 mRNA_1949 0.86 -0.9
585,297 - 10317 mRNA_1949 0.87 0.8
585,426 - -0.9
585,427 + -1.4
585,436 - 1.0
585,450 + 0.8
585,455 - -1.4
585,460 + -1.5
585,469 + 0.5
585,584 - -0.5
585,595 - -1.4
585,599 - -0.3
585,729 - 1.8
585,737 - -0.3
585,947 + -0.5
586,188 - -0.8