Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1923

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1921: 10289 - KOG4373 Predicted 3'-5' exonuclease, at 517842 to 518810 10289 mRNA_1922: 10290 - Hypothetical Protein, at 518847 to 519239 10290 mRNA_1923: 10291 - K19787 CARNMT1 carnosine N-methyltransferase, at 519459 to 521071 10291 mRNA_1924: 10292 - K00763 pncB, NAPRT1 nicotinate phosphoribosyltransferase, at 521294 to 523495 10292

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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518,611 - 10289 mRNA_1921 0.79 0.7
518,615 - 10289 mRNA_1921 0.80 2.8
518,936 - 10290 mRNA_1922 0.23 0.4
519,163 - 10290 mRNA_1922 0.80 -0.2
519,377 - -0.2
519,674 + 10291 mRNA_1923 0.13 0.7
520,262 - 10291 mRNA_1923 0.50 0.3
520,289 + 10291 mRNA_1923 0.51 0.0
520,403 + 10291 mRNA_1923 0.59 0.6
520,562 + 10291 mRNA_1923 0.68 0.0
520,961 - 1.3
520,987 + -0.4
521,109 - -0.8
521,119 + 0.8
521,123 - -0.5
521,274 + 0.1
521,278 + 0.6
521,286 + -0.1
521,318 + 0.1
521,432 + 0.7
521,435 - -1.7
521,482 + 0.1
521,567 - 10292 mRNA_1924 0.12 -0.9
521,726 - 10292 mRNA_1924 0.20 0.6
521,727 - 10292 mRNA_1924 0.20 -0.5
521,757 + 10292 mRNA_1924 0.21 -0.9
521,995 + 10292 mRNA_1924 0.32 0.2