Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1876

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1875: 10243 - Hypothetical Protein, at 415484 to 416261 10243 mRNA_1876: 10244 - Hypothetical Protein, at 416392 to 418180 10244 mRNA_1877: 10245 - K03363 CDC20 cell division cycle 20, cofactor of APC complex, at 418587 to 420557 10245

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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415,721 + 10243 mRNA_1875 0.30 0.3
416,426 + -0.2
417,449 + 10244 mRNA_1876 0.59 0.1
417,888 + 10244 mRNA_1876 0.84 1.1
418,023 - 1.2
418,145 - 1.4
418,151 - -1.2
418,184 + 1.9
418,204 + 1.1
418,210 + -1.5
418,330 + 0.5
418,345 - 0.6
418,351 - -0.2
418,357 + -0.3
418,365 + -0.4
418,365 - -1.4
418,365 + 0.0
418,367 - -0.1
418,368 + 0.5
418,370 + 1.0
418,371 + -0.1
418,372 + -0.0
418,382 + 0.6
418,383 + -0.7
418,397 - 0.1
418,400 - 0.1
418,401 + -0.8
418,403 + -1.2
418,408 - 0.2
418,412 + 0.6
418,418 - 0.8
418,426 + -0.1
418,427 - -0.2
418,482 + 0.1
418,485 - -0.4
418,492 - 0.6
418,492 + -0.1
418,494 - 1.3
418,495 + -0.7
418,496 + -0.9
418,503 + 0.4
418,504 + 2.7
418,510 + 0.6
418,527 - -1.4