Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1848

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1847: 10215 - BLAST GDP-fucose protein O-fucosyltransferase [Rhizopogon v..., at 360311 to 362309 10215 mRNA_1848: 10216 - BLAST PC-Esterase [Xanthophyllomyces dendrorhous], at 362950 to 364987 10216 mRNA_1849: 10217 - Hypothetical Protein, at 365239 to 367490 10217

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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362,009 - 10215 mRNA_1847 0.85 -0.4
362,329 + -1.8
362,352 - -0.7
362,382 - 0.3
362,404 - 0.6
362,488 - 1.1
362,489 - 0.8
362,509 - 0.6
362,516 + 0.7
362,518 - -0.5
362,519 - 1.0
362,527 + -0.5
362,538 - 1.2
362,541 + 0.5
362,545 + 0.6
362,545 + 0.4
362,555 + 0.0
362,557 + -0.7
362,559 + -1.3
362,560 - -0.5
362,564 - -0.3
362,567 - 1.5
362,571 - 0.3
362,571 + 0.2
362,584 - -0.3
362,589 + 0.4
362,605 - -0.4
362,628 - -0.9
362,639 - 0.4
362,640 + 0.2
362,641 + 0.3
362,643 + -0.9
362,644 + 0.1
362,647 - 1.2
362,676 - -0.1
362,676 + -1.0
362,689 - 0.6
362,692 + 1.0
362,693 + -0.3
362,698 - -0.1
362,698 - 0.2
362,702 - -0.8
362,708 + 1.3
362,717 - -0.5
362,717 + 0.1
362,721 - -0.4
362,726 - 0.9
362,731 - 0.5
362,732 + -0.2
362,735 - -0.3
362,750 + -0.4
362,751 + 1.6
362,752 + 1.0
362,753 + -0.8
362,753 + 0.1
362,758 - -0.4
362,764 - 0.7
362,766 - 1.5
362,775 + -0.2
362,775 - -1.0
362,776 + 0.2
362,778 + -0.3
362,789 + -1.3
362,797 - -0.3
362,801 + -0.5
362,803 + -0.1
362,812 + -1.2
362,813 + 1.2
362,911 + 0.8
362,912 - 0.6
362,945 - 0.3
362,949 - 0.3
363,058 + 0.6
363,086 - -0.3
363,093 + 0.3
363,097 - 1.8
363,230 - 10216 mRNA_1848 0.14 1.3
363,257 + 10216 mRNA_1848 0.15 -0.4
363,374 + 10216 mRNA_1848 0.21 -1.0
363,587 - 10216 mRNA_1848 0.31 0.7
363,802 + 10216 mRNA_1848 0.42 0.3
363,960 - 10216 mRNA_1848 0.50 1.5
364,241 - 10216 mRNA_1848 0.63 1.5
364,403 - 10216 mRNA_1848 0.71 0.3
364,535 + 10216 mRNA_1848 0.78 -1.9
364,576 + 10216 mRNA_1848 0.80 -2.1
364,707 + 10216 mRNA_1848 0.86 0.4
364,868 - 0.4
364,878 + -0.5
365,167 + 0.9
365,610 + 10217 mRNA_1849 0.16 0.2
365,819 - 10217 mRNA_1849 0.26 1.1
365,855 + 10217 mRNA_1849 0.27 0.1