Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1787

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1786: 10154 - K04078 groES, HSPE1 chaperonin GroES, at 206965 to 207485 10154 mRNA_1787: 10155 - HMMPfam-Tctex-1 family-PF03645, at 207900 to 208690 10155 mRNA_1788: 10156 - K16368 DGK1 diacylglycerol kinase (CTP), at 208859 to 210446 10156

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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207,747 - -0.1
208,042 - 10155 mRNA_1787 0.18 -1.1
208,176 - 10155 mRNA_1787 0.35 0.9
208,349 - 10155 mRNA_1787 0.57 -0.2
208,476 - 10155 mRNA_1787 0.73 -1.5
208,780 + 1.4
208,781 - 1.0
208,788 - -1.2
208,794 - -2.0
208,799 - 1.6
208,808 + 1.6
208,929 - -3.6
208,956 - -0.7
209,078 + 10156 mRNA_1788 0.14 -0.7
209,128 - 10156 mRNA_1788 0.17 -0.0
209,232 - 10156 mRNA_1788 0.23 1.9
209,245 + 10156 mRNA_1788 0.24 -0.7
209,313 + 10156 mRNA_1788 0.29 0.1
209,527 + 10156 mRNA_1788 0.42 -0.6
209,563 - 10156 mRNA_1788 0.44 -0.4