Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1772

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1771: 10139 - K14312 NUP155, NUP170, NUP157 nuclear pore complex protein Nup155, at 163525 to 168544 10139 mRNA_1772: 10140 - K01480 speB agmatinase, at 169490 to 170600 10140 mRNA_1773: 10141 - Hypothetical Protein, at 171350 to 172928 10141

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
168,629 - 0.0
168,765 - -0.8
168,830 - -1.2
169,061 - -1.2
169,061 - -0.2
169,067 + -1.0
169,067 + -1.5
169,100 - -0.6
169,374 - 0.4
169,457 - -0.5
169,636 - 10140 mRNA_1772 0.13 0.1
169,931 - 10140 mRNA_1772 0.40 0.6
169,968 + 10140 mRNA_1772 0.43 -0.1
170,010 - 10140 mRNA_1772 0.47 0.7
170,066 + 10140 mRNA_1772 0.52 1.0
170,357 - 10140 mRNA_1772 0.78 0.4
170,361 - 10140 mRNA_1772 0.78 -2.1
170,521 - 2.1
170,664 - -0.0
170,686 + 0.1
170,820 + 2.2
170,824 + -1.7
170,827 - 0.6
170,837 - 0.9
170,847 - -0.3
170,971 - 0.4
171,115 + 0.7
171,231 - -0.4
171,239 + -1.9
171,240 - -0.2
171,280 + -0.6
171,414 - 1.6