Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1738

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1737: 10105 - KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1, at 80884 to 82688 10105 mRNA_1738: 10106 - Hypothetical Protein, at 82841 to 84052 10106 mRNA_1739: 10107 - Hypothetical Protein, at 84456 to 87207 10107

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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81,856 + 10105 mRNA_1737 0.54 1.1
82,256 - 10105 mRNA_1737 0.76 1.0
82,267 - 10105 mRNA_1737 0.77 -0.2
82,282 + 10105 mRNA_1737 0.77 -0.2
82,450 + 10105 mRNA_1737 0.87 0.1
82,632 - 0.9
82,735 - -1.1
82,875 - 0.1
83,144 - 10106 mRNA_1738 0.25 -0.4
83,298 + 10106 mRNA_1738 0.38 -0.2
83,474 + 10106 mRNA_1738 0.52 -0.1
83,488 + 10106 mRNA_1738 0.53 2.0
83,569 - 10106 mRNA_1738 0.60 0.5
83,653 - 10106 mRNA_1738 0.67 0.2
83,719 - 10106 mRNA_1738 0.72 1.7
83,768 - 10106 mRNA_1738 0.76 0.8
83,805 - 10106 mRNA_1738 0.80 0.5
83,861 + 10106 mRNA_1738 0.84 -0.0
83,918 + 10106 mRNA_1738 0.89 1.6
84,468 + -0.4
84,496 + -0.7
84,500 - -0.2
84,619 - 0.1
84,840 + 10107 mRNA_1739 0.14 -0.3
84,848 + 10107 mRNA_1739 0.14 -0.9
84,908 + 10107 mRNA_1739 0.16 0.2
84,917 - 10107 mRNA_1739 0.17 0.9
84,933 - 10107 mRNA_1739 0.17 0.8
84,951 + 10107 mRNA_1739 0.18 0.9