Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1726

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1725: 10093 - KOG2343 Glucose-repressible protein and related proteins, at 46697 to 49542 10093 mRNA_1726: 10094 - BLAST Protein priA [Grifola frondosa], at 50052 to 51969 10094

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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49,111 + 10093 mRNA_1725 0.85 1.2
49,429 + 0.8
49,516 - 0.8
49,581 + 1.1
49,653 + 0.3
49,738 - -0.0
49,995 + 0.6
49,999 - 0.7
50,094 + 2.5
50,176 + 0.2
50,523 - 10094 mRNA_1726 0.25 -0.1
50,543 - 10094 mRNA_1726 0.26 1.0
50,559 - 10094 mRNA_1726 0.26 2.0
50,850 - 10094 mRNA_1726 0.42 -0.2
50,919 + 10094 mRNA_1726 0.45 0.8
51,152 - 10094 mRNA_1726 0.57 0.1
51,444 - 10094 mRNA_1726 0.73 2.6
51,546 - 10094 mRNA_1726 0.78 0.0
51,714 - 10094 mRNA_1726 0.87 1.5
51,718 - 10094 mRNA_1726 0.87 1.3
51,739 - 10094 mRNA_1726 0.88 3.7
51,750 + 10094 mRNA_1726 0.89 0.4
51,783 + 2.4
51,879 - 1.7
51,903 + 0.5
51,906 - 2.6
52,089 + 1.1
52,168 - 1.1
52,168 + 1.4
52,194 - 0.5
52,196 - 0.1
52,198 + 1.2
52,221 + -0.3
52,228 - 0.2
52,230 - 2.0
52,234 - 0.9
52,302 - -0.7
52,336 + -0.1
52,339 + -1.0
52,339 - -0.5
52,339 - 0.8
52,342 - 0.3
52,346 + 0.4
52,364 + 2.6
52,371 + 2.4
52,400 - 0.3
52,411 + 0.4
52,414 + 0.1
52,461 + -0.2
52,492 - -0.0
52,515 - 0.5
52,524 + -0.3
52,574 + 0.2
52,576 - -0.5
52,589 + 1.9
52,618 + 0.9
52,642 - 1.1
52,685 - -1.2
52,740 + 1.0
52,772 + 0.6