Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1712

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1711: 10079 - K01887 RARS, argS arginyl-tRNA synthetase, at 9070 to 11520 10079 mRNA_1712: 10080 - KOG2131 Uncharacterized conserved protein, contains JmjC domain, at 12015 to 13653 10080 mRNA_1713: 10081 - KOG0022 Alcohol dehydrogenase, class III, at 13985 to 15656 10081

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
11,779 - 1.1
11,926 + -0.3
11,942 - 0.3
12,141 - -0.5
12,215 - 10080 mRNA_1712 0.12 1.3
12,434 - 10080 mRNA_1712 0.26 -0.8
12,533 - 10080 mRNA_1712 0.32 -0.5
12,588 - 10080 mRNA_1712 0.35 0.0
12,605 - 10080 mRNA_1712 0.36 0.4
12,636 - 10080 mRNA_1712 0.38 1.1
13,057 + 10080 mRNA_1712 0.64 0.5
13,118 - 10080 mRNA_1712 0.67 1.2
13,215 + 10080 mRNA_1712 0.73 0.1
13,277 + 10080 mRNA_1712 0.77 1.6
13,521 + -0.7
13,805 - -0.4
13,961 - 0.4
13,969 + -0.3
13,990 - -0.5
14,076 - 1.3
14,109 - 0.5
14,130 - 0.8
14,146 + -1.8
14,250 + 10081 mRNA_1713 0.16 0.7
14,354 - 10081 mRNA_1713 0.22 -0.1
14,391 + 10081 mRNA_1713 0.24 1.4
14,404 + 10081 mRNA_1713 0.25 0.5
14,417 + 10081 mRNA_1713 0.26 0.3
14,429 + 10081 mRNA_1713 0.27 1.1
14,465 - 10081 mRNA_1713 0.29 0.4
14,506 - 10081 mRNA_1713 0.31 -0.6
14,607 - 10081 mRNA_1713 0.37 1.4
14,615 - 10081 mRNA_1713 0.38 0.2
14,617 + 10081 mRNA_1713 0.38 0.5
14,639 + 10081 mRNA_1713 0.39 1.0