Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1692

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1692: 10060 - K20292 COG5 conserved oligomeric Golgi complex subunit 5, at 908144 to 911524 10060 mRNA_1693: 10061 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 911784 to 914454 10061

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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907,279 + 1.6
907,439 + 0.1
907,724 + 0.5
907,743 - 0.1
907,886 + 2.3
908,047 - 1.2
908,054 + -0.2
908,328 - 1.0
908,586 - 10060 mRNA_1692 0.13 1.0
908,645 + 10060 mRNA_1692 0.15 -0.1
908,906 + 10060 mRNA_1692 0.23 -0.5
908,944 + 10060 mRNA_1692 0.24 1.4
909,024 - 10060 mRNA_1692 0.26 0.8
909,218 - 10060 mRNA_1692 0.32 2.4
909,222 + 10060 mRNA_1692 0.32 0.1
909,376 + 10060 mRNA_1692 0.36 0.7
909,807 + 10060 mRNA_1692 0.49 0.6
909,964 - 10060 mRNA_1692 0.54 1.3
910,243 - 10060 mRNA_1692 0.62 0.9
910,353 + 10060 mRNA_1692 0.65 0.2
910,368 + 10060 mRNA_1692 0.66 0.0
910,478 + 10060 mRNA_1692 0.69 0.5
910,516 + 10060 mRNA_1692 0.70 1.2
910,700 - 10060 mRNA_1692 0.76 0.1
911,151 - 10060 mRNA_1692 0.89 0.8
911,463 + -2.2
911,592 - -0.1
911,622 + -0.2
911,635 - 0.7
911,773 + -0.5
911,777 + 0.2
911,933 - -0.2
911,999 - 0.3
912,026 - 0.4
912,307 + 10061 mRNA_1693 0.20 1.3
912,451 - 10061 mRNA_1693 0.25 0.4