Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1677

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1677: 10045 - K15620 GOLPH3, GPP34 golgi phosphoprotein 3, at 868769 to 870335 10045 mRNA_1678: 10046 - K09498 CCT6 T-complex protein 1 subunit zeta, at 870469 to 873019 10046

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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868,215 + 0.5
868,360 - 0.3
868,403 + -1.8
868,783 + -0.5
869,318 - 10045 mRNA_1677 0.35 3.0
869,373 + 10045 mRNA_1677 0.39 1.9
869,406 + 10045 mRNA_1677 0.41 2.8
869,520 - 10045 mRNA_1677 0.48 2.8
869,651 - 10045 mRNA_1677 0.56 3.5
869,780 - 10045 mRNA_1677 0.65 3.7
869,786 + 10045 mRNA_1677 0.65 2.4
869,809 + 10045 mRNA_1677 0.66 3.0
869,934 - 10045 mRNA_1677 0.74 2.4
869,966 - 10045 mRNA_1677 0.76 3.0
869,975 + 10045 mRNA_1677 0.77 2.1
869,987 + 10045 mRNA_1677 0.78 2.3
869,990 - 10045 mRNA_1677 0.78 3.3
869,993 - 10045 mRNA_1677 0.78 2.6
870,106 - 10045 mRNA_1677 0.85 1.2
870,108 + 10045 mRNA_1677 0.85 1.7
870,151 - 10045 mRNA_1677 0.88 3.5
870,160 + 10045 mRNA_1677 0.89 3.0
870,252 + 2.7
870,401 + -0.0
870,402 - 1.4
870,403 + 0.5
870,403 + -0.5
870,404 - 1.3
870,406 - 1.0
870,417 + -0.3
870,422 + -0.8
870,426 + -0.0
870,436 + 0.3
870,437 + 0.6