Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1386

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1385: 9753 - K06966 K06966 uncharacterized protein, at 145892 to 146941 9753 mRNA_1386: 9754 - K06966 K06966 uncharacterized protein, at 147599 to 148550 9754 mRNA_1387: 9755 - BLAST bromodomain-containing protein 8 [Cryptococcus ne..., at 148746 to 149519 9755

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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146,618 - 9753 mRNA_1385 0.69 0.4
146,748 - 9753 mRNA_1385 0.82 -0.9
146,924 - 0.1
146,958 + 0.8
147,043 - -1.9
147,053 - -0.1
147,074 + -1.0
147,512 - 0.4
147,657 - -0.5
147,674 + -0.0
148,066 + 9754 mRNA_1386 0.49 0.4
148,071 - 9754 mRNA_1386 0.50 -0.5
148,205 + 9754 mRNA_1386 0.64 1.6
148,213 + 9754 mRNA_1386 0.64 -2.4
148,517 - -0.1
148,551 + 0.1
148,799 + -1.4
148,816 + 0.1
148,820 - 0.8
148,831 + 9755 mRNA_1387 0.11 0.1
148,841 - 9755 mRNA_1387 0.12 1.0
148,956 - 9755 mRNA_1387 0.27 -0.1
149,117 - 9755 mRNA_1387 0.48 -0.3
149,131 - 9755 mRNA_1387 0.50 -0.5
149,135 + 9755 mRNA_1387 0.50 -0.1
149,137 - 9755 mRNA_1387 0.51 -0.3
149,138 + 9755 mRNA_1387 0.51 0.3
149,278 - 9755 mRNA_1387 0.69 -0.1
149,404 - 9755 mRNA_1387 0.85 -0.0
149,417 + 9755 mRNA_1387 0.87 0.4