Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1266

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1265: 9633 - K14861 URB1 nucleolar pre-ribosomal-associated protein 1, at 784543 to 790877 9633 mRNA_1266: 9634 - K00004 BDH, butB (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase, at 791102 to 792635 9634 mRNA_1267: 9635 - K00814 GPT, ALT alanine transaminase, at 793138 to 795041 9635

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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791,013 + -0.4
791,024 - -0.0
791,024 - 1.6
791,025 + 0.2
791,027 - -0.3
791,041 + 0.9
791,044 - 0.2
791,045 - 0.4
791,177 + 0.2
791,703 - 9634 mRNA_1266 0.39 -1.1
791,740 + 9634 mRNA_1266 0.42 -0.6
792,352 - 9634 mRNA_1266 0.81 -0.1
792,640 + -0.2
792,755 - 0.3
792,761 - 0.1
792,762 - -0.6
792,789 - -0.5
792,789 + 0.0
792,808 - 0.1
792,844 + 1.4
792,846 + 0.4
792,846 + 0.2
792,910 + -0.6
792,943 - 0.2
792,997 + -1.2
793,028 - -3.3
793,032 - -1.1
793,055 - -1.0
793,058 - -0.0
793,065 + 0.2
793,072 - 0.3
793,075 - -0.6
793,084 + -1.6
793,165 + 0.5
793,167 - -0.3
793,218 + -2.6
793,223 - -1.5
793,351 - 9635 mRNA_1267 0.11 -4.7
793,354 + 9635 mRNA_1267 0.11 -2.6
793,370 - 9635 mRNA_1267 0.12 -3.8
793,373 + 9635 mRNA_1267 0.12 -2.8
793,500 - 9635 mRNA_1267 0.19 -1.9
793,507 + 9635 mRNA_1267 0.19 -2.6
793,521 - 9635 mRNA_1267 0.20 -2.9