Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1175

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1174: 9542 - K15190 MEPCE, BCDIN3 7SK snRNA methylphosphate capping enzyme, at 575723 to 577057 9542 mRNA_1175: 9543 - Hypothetical Protein, at 577542 to 578636 9543 mRNA_1176: 9544 - Hypothetical Protein, at 578866 to 579597 9544

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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576,542 - 9542 mRNA_1174 0.61 1.3
576,548 + 9542 mRNA_1174 0.62 0.8
576,571 + 9542 mRNA_1174 0.64 0.0
576,600 - 9542 mRNA_1174 0.66 0.1
576,649 - 9542 mRNA_1174 0.69 0.0
576,688 - 9542 mRNA_1174 0.72 0.3
576,742 - 9542 mRNA_1174 0.76 0.7
576,745 - 9542 mRNA_1174 0.77 0.2
576,857 + 9542 mRNA_1174 0.85 -0.9
576,979 + 1.0
576,984 + 1.1
577,026 + 0.1
577,118 - 0.1
577,139 - -0.1
577,610 + -0.4
577,639 + -0.3
577,824 - 9543 mRNA_1175 0.26 -0.4
577,854 + 9543 mRNA_1175 0.28 1.4
577,881 - 9543 mRNA_1175 0.31 -0.2
577,991 + 9543 mRNA_1175 0.41 1.2
578,076 - 9543 mRNA_1175 0.49 0.9
578,084 + 9543 mRNA_1175 0.49 0.4
578,485 - 9543 mRNA_1175 0.86 0.5
578,787 + 0.8
578,798 - -0.6
578,936 + -0.0
578,954 - 9544 mRNA_1176 0.12 -0.7
579,077 - 9544 mRNA_1176 0.29 -0.4
579,097 + 9544 mRNA_1176 0.32 0.1
579,097 + 9544 mRNA_1176 0.32 0.3
579,377 + 9544 mRNA_1176 0.70 -0.3
579,410 + 9544 mRNA_1176 0.74 0.6
579,415 - 9544 mRNA_1176 0.75 0.2
579,422 - 9544 mRNA_1176 0.76 -1.0
579,547 + 0.7
579,554 - 0.2
579,555 + -0.3