Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1065

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1064: 9432 - K05533 ANP1 mannan polymerase II complex ANP1 subunit, at 316506 to 317869 9432 mRNA_1065: 9433 - Hypothetical Protein, at 318251 to 319455 9433 mRNA_1066: 9434 - KOG1383 Glutamate decarboxylase/sphingosine phosphate lyase, at 320131 to 322252 9434

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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317,787 + 0.9
317,932 - 0.7
317,936 - -0.2
317,947 - 0.4
318,078 - 0.2
318,078 - 0.1
318,090 + 0.2
318,097 + 0.2
318,098 + -2.0
318,100 - -0.5
318,101 + 0.8
318,199 + 0.0
318,394 - 9433 mRNA_1065 0.12 -0.4
318,398 + 9433 mRNA_1065 0.12 -0.7
318,404 - 9433 mRNA_1065 0.13 0.4
318,560 + 9433 mRNA_1065 0.26 -0.0
318,820 - 9433 mRNA_1065 0.47 -1.0
319,586 + 0.4
319,669 - -0.0
319,690 + 0.3
319,691 + -0.3
319,744 + 1.5
319,766 - -0.3
319,783 + -0.2
319,802 + 0.0
319,836 - 1.2
319,853 - -0.4
319,859 + 0.0
319,866 - 0.4
319,868 - 0.3
319,953 + -0.3
320,120 - -1.0
320,239 - 0.0
320,249 - 1.6
320,273 + -0.4
320,303 + 0.6
320,381 + 9434 mRNA_1066 0.12 -0.3
320,387 + 9434 mRNA_1066 0.12 -0.4
320,445 - 9434 mRNA_1066 0.15 -0.1
320,445 + 9434 mRNA_1066 0.15 1.0