Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1062

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1061: 9429 - BLAST heat shock 70 kDa protein 12A [Rhizoctonia solani AG-..., at 308503 to 311284 9429 mRNA_1062: 9430 - K10742 DNA2 DNA replication ATP-dependent helicase Dna2, at 311379 to 314968 9430 mRNA_1063: 9431 - BLAST DNA replication ATP-dependent helicase Dna2 [Rhod..., at 315591 to 316093 9431

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
310,578 - 9429 mRNA_1061 0.75 -0.0
310,646 - 9429 mRNA_1061 0.77 0.9
310,646 - 9429 mRNA_1061 0.77 -4.0
310,665 + 9429 mRNA_1061 0.78 -1.6
310,707 - 9429 mRNA_1061 0.79 -0.5
310,752 - 9429 mRNA_1061 0.81 0.4
310,755 - 9429 mRNA_1061 0.81 -0.9
310,758 + 9429 mRNA_1061 0.81 -1.6
310,767 + 9429 mRNA_1061 0.81 -0.6
310,971 + 9429 mRNA_1061 0.89 -0.8
311,062 + 0.8
311,217 + 1.0
311,349 + 1.0
311,349 - -1.4
311,372 + -1.6
311,393 + -0.7
311,905 - 9430 mRNA_1062 0.15 0.1
312,482 + 9430 mRNA_1062 0.31 0.8
312,536 + 9430 mRNA_1062 0.32 -0.4
312,913 + 9430 mRNA_1062 0.43 -0.5
312,918 - 9430 mRNA_1062 0.43 0.4
312,979 - 9430 mRNA_1062 0.45 0.7
313,090 + 9430 mRNA_1062 0.48 0.5
313,134 + 9430 mRNA_1062 0.49 -0.1
313,215 - 9430 mRNA_1062 0.51 -1.5
313,227 - 9430 mRNA_1062 0.51 1.4
313,238 - 9430 mRNA_1062 0.52 -0.0
313,315 + 9430 mRNA_1062 0.54 -0.6
313,420 + 9430 mRNA_1062 0.57 0.3
313,459 + 9430 mRNA_1062 0.58 0.4
313,471 + 9430 mRNA_1062 0.58 0.6
313,497 + 9430 mRNA_1062 0.59 -0.1
313,510 + 9430 mRNA_1062 0.59 -1.1
313,692 + 9430 mRNA_1062 0.64 0.5
313,960 - 9430 mRNA_1062 0.72 1.2
314,187 - 9430 mRNA_1062 0.78 -0.7
314,568 + 9430 mRNA_1062 0.89 -1.2
314,610 + -1.0
314,611 - -0.1
314,716 + 0.1
314,833 + -0.2
314,883 - -1.6
314,890 + 0.4
315,026 + 1.3
315,036 + -0.6
315,120 + -0.1
315,148 + -0.0
315,255 - -0.3
315,290 - 0.0
315,416 + 0.9
315,448 + -0.4
315,557 + 1.3
315,702 - 9431 mRNA_1063 0.22 -0.9
315,705 + 9431 mRNA_1063 0.23 0.1
315,855 - 9431 mRNA_1063 0.52 2.0
315,881 + 9431 mRNA_1063 0.58 -0.7