Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_877

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_876: 9244 - K00297 metF, MTHFR methylenetetrahydrofolate reductase (NADPH), at 2089626 to 2091862 9244 mRNA_877: 9245 - K07425 CYP4A alkane 1-monooxygenase, at 2092667 to 2095053 9245 mRNA_878: 9246 - K14692 SLC30A5_7, ZNT5_7, MTP, MSC2 solute carrier family 30 (zinc transporter), member 5/7, at 2095411 to 2098626 9246

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
2,091,717 + -3.9
2,092,031 - 1.7
2,092,153 - 0.3
2,092,159 - -0.7
2,092,163 + 0.2
2,092,307 + -0.4
2,092,323 + -0.0
2,092,447 - -0.3
2,092,562 + -0.1
2,092,877 + 0.2
2,093,049 + 9245 mRNA_877 0.16 0.4
2,093,444 - 9245 mRNA_877 0.33 -0.6
2,093,462 + 9245 mRNA_877 0.33 -0.5
2,093,484 - 9245 mRNA_877 0.34 1.1
2,093,657 - 9245 mRNA_877 0.41 0.6
2,093,780 - 9245 mRNA_877 0.47 0.6
2,093,796 + 9245 mRNA_877 0.47 -0.9
2,094,626 - 9245 mRNA_877 0.82 -0.2
2,094,771 - 9245 mRNA_877 0.88 0.0
2,095,005 + -1.5
2,095,042 + -0.9
2,095,197 + -1.2
2,095,329 + -0.3
2,095,329 + 0.3
2,095,330 + 1.9
2,095,364 + -0.9
2,095,490 - 0.3
2,095,493 + 0.8
2,095,497 + 0.6
2,095,503 - 1.4
2,095,634 + 1.7
2,095,774 - 9246 mRNA_878 0.11 0.1
2,095,774 - 9246 mRNA_878 0.11 -1.3