Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_847

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_846: 9214 - KOG2710 Rho GTPase-activating protein, at 2027534 to 2029466 9214 mRNA_847: 9215 - HMMPfam-Amino acid permease-PF13520, at 2029732 to 2032618 9215 mRNA_848: 9216 - K17989 SDS, SDH, CHA1 L-serine/L-threonine ammonia-lyase, at 2033096 to 2034366 9216

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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2,029,037 - 9214 mRNA_846 0.78 -0.3
2,029,178 + 9214 mRNA_846 0.85 0.8
2,029,241 - 9214 mRNA_846 0.88 0.8
2,029,319 - -1.6
2,029,323 - -1.2
2,029,468 - -0.8
2,029,610 + -1.5
2,029,610 - 1.0
2,029,637 - 0.8
2,029,638 - -0.4
2,029,644 - -1.6
2,029,728 + 0.5
2,029,920 + 1.0
2,029,955 + -1.5
2,029,966 - -0.9
2,030,160 + 9215 mRNA_847 0.15 0.1
2,030,224 - 9215 mRNA_847 0.17 -0.2
2,030,232 + 9215 mRNA_847 0.17 -0.5
2,030,488 + 9215 mRNA_847 0.26 -0.2
2,030,777 - 9215 mRNA_847 0.36 0.9
2,031,673 - 9215 mRNA_847 0.67 -0.0
2,031,790 + 9215 mRNA_847 0.71 0.4
2,031,795 + 9215 mRNA_847 0.71 -0.5
2,032,081 - 9215 mRNA_847 0.81 0.8
2,032,144 - 9215 mRNA_847 0.84 -0.1
2,032,246 - 9215 mRNA_847 0.87 1.0
2,032,246 + 9215 mRNA_847 0.87 -0.0
2,032,526 + 0.3
2,032,555 + -0.2
2,032,558 + -0.8
2,032,676 - -0.2
2,032,691 + 0.3
2,032,707 + -0.6
2,032,783 - -0.0
2,032,824 - 0.6
2,032,837 - 0.3
2,032,864 - -0.8
2,033,007 - -0.2
2,033,014 + 0.5
2,033,028 - 2.1
2,033,290 + 9216 mRNA_848 0.15 0.6