Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_754

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_753: 9121 - K02737 PSMB5 20S proteasome subunit beta 5, at 1798377 to 1799752 9121 mRNA_754: 9122 - KOG0143 Iron/ascorbate family oxidoreductases, at 1800031 to 1801635 9122 mRNA_755: 9123 - HMMPfam-Ribosomal protein L9, N-terminal domain-PF01281,SUPERFAMILY--SSF55658, at 1802135 to 1802908 9123

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,799,048 + 9121 mRNA_753 0.49 -0.4
1,799,428 - 9121 mRNA_753 0.76 0.9
1,799,733 - 1.5
1,799,812 - 0.5
1,799,831 + 0.2
1,799,897 - 0.3
1,799,898 - 0.0
1,799,899 - 1.2
1,799,904 - -0.3
1,799,914 - -0.5
1,799,915 - -1.9
1,799,921 - -1.4
1,799,922 + 0.4
1,799,924 + -0.5
1,799,924 + 0.1
1,799,931 + -0.0
1,799,933 + 0.3
1,799,936 + -0.1
1,799,936 + -0.9
1,799,937 + 1.5
1,799,941 + -0.0
1,799,960 - 0.0
1,800,045 + 1.0
1,800,340 - 9122 mRNA_754 0.19 -0.4
1,800,514 - 9122 mRNA_754 0.30 -0.1
1,800,943 - 9122 mRNA_754 0.57 0.4
1,800,951 + 9122 mRNA_754 0.57 0.0
1,801,099 - 9122 mRNA_754 0.67 0.1
1,801,102 + 9122 mRNA_754 0.67 1.6
1,801,231 + 9122 mRNA_754 0.75 -0.2
1,801,588 + 0.9
1,801,687 + -0.5
1,801,701 - -0.6
1,801,845 + 0.9
1,801,848 - -2.2
1,801,849 + 0.9
1,801,938 + 0.6
1,802,277 - 9123 mRNA_755 0.18 1.2
1,802,279 + 9123 mRNA_755 0.19 2.0
1,802,545 - 9123 mRNA_755 0.53 0.4