Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_752

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_751: 9119 - K19476 IST1 vacuolar protein sorting-associated protein IST1, at 1793395 to 1794980 9119 mRNA_752: 9120 - K12822 RBM25, S164 RNA-binding protein 25, at 1795161 to 1797625 9120 mRNA_753: 9121 - K02737 PSMB5 20S proteasome subunit beta 5, at 1798377 to 1799752 9121

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,794,202 + 9119 mRNA_751 0.51 -0.2
1,794,214 + 9119 mRNA_751 0.52 0.2
1,794,355 - 9119 mRNA_751 0.61 -0.3
1,794,612 - 9119 mRNA_751 0.77 0.0
1,794,628 - 9119 mRNA_751 0.78 0.2
1,794,639 - 9119 mRNA_751 0.78 -0.9
1,794,916 + -0.2
1,795,121 + -0.4
1,795,390 - -1.1
1,795,980 - 9120 mRNA_752 0.33 -1.2
1,796,701 + 9120 mRNA_752 0.62 0.6
1,796,833 - 9120 mRNA_752 0.68 -0.2
1,797,164 + 9120 mRNA_752 0.81 0.1
1,797,235 + 9120 mRNA_752 0.84 0.2
1,797,558 + 0.3
1,797,558 - -1.1
1,797,573 - -0.8
1,797,573 + -0.4
1,797,581 - -1.0
1,797,799 + -1.0
1,797,876 + 0.1
1,797,963 - 0.2
1,798,130 + -0.7
1,798,151 + 0.6
1,798,206 + -1.0
1,798,313 + -1.1