Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_745

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_744: 9112 - KOG2533 Permease of the major facilitator superfamily, at 1777917 to 1780253 9112 mRNA_745: 9113 - K00101 E1.1.2.3, lldD L-lactate dehydrogenase (cytochrome), at 1780451 to 1782779 9113 mRNA_746: 9114 - KOG0143 Iron/ascorbate family oxidoreductases, at 1783112 to 1784758 9114

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,779,875 - 9112 mRNA_744 0.84 1.2
1,780,114 + -0.9
1,780,117 - 0.6
1,780,375 + 1.2
1,780,573 + -0.6
1,780,575 - -0.6
1,780,707 + 9113 mRNA_745 0.11 0.1
1,780,714 + 9113 mRNA_745 0.11 0.3
1,780,784 - 9113 mRNA_745 0.14 1.0
1,780,866 - 9113 mRNA_745 0.18 0.4
1,781,264 + 9113 mRNA_745 0.35 -0.4
1,781,707 + 9113 mRNA_745 0.54 0.1
1,782,079 - 9113 mRNA_745 0.70 1.2
1,782,081 - 9113 mRNA_745 0.70 -0.4
1,782,119 + 9113 mRNA_745 0.72 0.2
1,782,273 + 9113 mRNA_745 0.78 0.5
1,782,551 - 0.1
1,782,555 + -0.2
1,782,559 - 0.9
1,782,568 + 0.4
1,782,578 + 0.0
1,782,579 - 0.4
1,782,580 - -0.0
1,782,585 - 0.7
1,782,592 + 0.6
1,782,680 - 0.9
1,782,864 + -0.2
1,782,865 + 0.7
1,782,866 + 0.6
1,782,871 - 0.1
1,782,877 - 0.3
1,782,885 + 0.8
1,782,887 - -0.1
1,782,893 + 0.7
1,782,917 - -0.2
1,782,948 + -0.1
1,783,188 + -0.1
1,783,191 - 1.0
1,783,197 + -0.4
1,783,305 + 9114 mRNA_746 0.12 0.6
1,783,314 + 9114 mRNA_746 0.12 0.7
1,783,317 + 9114 mRNA_746 0.12 0.4
1,783,340 - 9114 mRNA_746 0.14 -0.1
1,783,349 - 9114 mRNA_746 0.14 0.2
1,783,661 - 9114 mRNA_746 0.33 0.2