Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_723

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_722: 9090 - HMMPfam-Thiopurine S-methyltransferase (TPMT)-PF05724,ProSiteProfiles-Thiopurine or thiol or thiocyanate S-methyltransferase (TPMT) family profile.-PS51585,SUPERFAMILY--SSF53335, at 1721535 to 1722519 9090 mRNA_723: 9091 - K07127 uraH, pucM, hiuH 5-hydroxyisourate hydrolase, at 1722992 to 1724496 9091 mRNA_724: 9092 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 1724754 to 1725732 9092

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,722,134 + 9090 mRNA_722 0.61 0.5
1,722,559 - -1.2
1,722,575 + 1.1
1,722,575 + -1.0
1,722,719 + -0.4
1,723,272 - 9091 mRNA_723 0.19 0.3
1,723,280 + 9091 mRNA_723 0.19 0.4
1,723,463 - 9091 mRNA_723 0.31 -0.3
1,723,570 - 9091 mRNA_723 0.38 -0.9
1,723,629 + 9091 mRNA_723 0.42 -0.6
1,723,629 + 9091 mRNA_723 0.42 -0.3
1,723,630 - 9091 mRNA_723 0.42 0.1
1,723,745 - 9091 mRNA_723 0.50 -0.3
1,723,896 - 9091 mRNA_723 0.60 -0.4
1,723,902 - 9091 mRNA_723 0.60 0.4
1,723,909 + 9091 mRNA_723 0.61 -0.2
1,724,051 - 9091 mRNA_723 0.70 -1.6
1,724,057 - 9091 mRNA_723 0.71 -0.1
1,724,071 - 9091 mRNA_723 0.72 0.1
1,724,072 + 9091 mRNA_723 0.72 -0.1
1,724,228 - 9091 mRNA_723 0.82 -0.2
1,724,229 + 9091 mRNA_723 0.82 -2.8
1,724,240 + 9091 mRNA_723 0.83 -0.8
1,724,349 - -1.5
1,724,457 - -0.1
1,724,472 - 0.2
1,724,473 - 0.6
1,724,473 - 0.0
1,724,483 - -0.1
1,724,484 - -0.8
1,724,485 - -0.8
1,724,486 + 0.3
1,724,489 + 0.7
1,724,492 + -1.1
1,724,496 - 0.2
1,724,550 - -1.0
1,724,565 - 0.2
1,724,573 + 2.8
1,724,638 - -0.2
1,724,670 - 0.0
1,724,672 - 0.0
1,724,672 - -2.0
1,724,678 - 0.1
1,724,684 - -0.7
1,724,687 + 0.4
1,724,688 + -0.5
1,724,690 - 0.4
1,724,699 + 0.3
1,724,702 - 1.0
1,724,704 + 0.5
1,724,710 - 0.0
1,724,711 - 1.1
1,724,796 + -0.8
1,724,830 - 0.5
1,724,874 - 9092 mRNA_724 0.12 0.7
1,724,887 + 9092 mRNA_724 0.14 -1.6
1,724,984 + 9092 mRNA_724 0.23 0.6
1,724,998 - 9092 mRNA_724 0.25 -0.4
1,725,420 + 9092 mRNA_724 0.68 -0.6