Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_550

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_549: 8917 - K12618 XRN1, SEP1, KEM1 5'-3' exoribonuclease 1, at 1306606 to 1311810 8917 mRNA_550: 8918 - KOG4391 Predicted alpha/beta hydrolase BEM46, at 1312000 to 1313154 8918 mRNA_551: 8919 - KOG1515 Arylacetamide deacetylase, at 1313966 to 1316695 8919

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,311,216 - 8917 mRNA_549 0.89 -0.2
1,311,746 + -0.4
1,311,777 + 0.8
1,311,928 - -0.8
1,311,974 + 0.7
1,312,120 + 8918 mRNA_550 0.10 -0.6
1,312,380 + 8918 mRNA_550 0.33 0.2
1,312,539 + 8918 mRNA_550 0.47 -0.5
1,313,263 - 1.0
1,313,268 + 0.3
1,313,447 + 0.2
1,313,554 + 0.5
1,313,591 + 1.1
1,313,684 + -0.1
1,313,694 - -0.1
1,313,696 + -0.6
1,313,696 + 0.3
1,313,714 + -0.9
1,313,719 + -0.5
1,313,734 + -0.0
1,313,735 - 0.3
1,313,746 + 0.2
1,313,752 + -0.3
1,313,754 + 0.5
1,313,902 + 0.5