Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_282

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_281: 8649 - KOG0653 Cyclin B and related kinase-activating proteins, at 669704 to 671491 8649 mRNA_282: 8650 - Hypothetical Protein, at 672440 to 673215 8650 mRNA_283: 8651 - K00872 thrB1 homoserine kinase, at 673914 to 675244 8651

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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671,498 - 0.0
671,498 - -0.8
671,509 - -0.4
671,537 + -2.0
671,561 - -1.6
671,564 + 0.6
671,665 - 0.7
671,674 - 0.1
671,681 + 0.1
671,681 - 1.1
671,694 + 1.0
671,694 + 1.9
671,700 - 0.4
671,704 + 0.7
671,825 + 0.0
671,843 + 0.9
671,845 - 0.2
671,846 - 1.2
671,848 + 0.5
671,850 - 1.8
671,854 + 0.4
671,863 - 0.6
671,866 - 0.9
671,866 + 0.7
671,866 + 0.6
671,867 - -0.5
671,873 + 1.0
671,875 - 0.9
671,875 - 0.7
671,881 + 0.4
671,885 + 0.7
671,886 - 1.0
671,893 - 0.4
671,902 + -1.0
671,920 + 0.9
671,927 + 0.2
671,995 - -0.4
672,003 + 0.3
672,004 - -1.0
672,009 - 0.7
672,018 + 1.5
672,023 - -0.1
672,029 - 0.4
672,029 + 0.7
672,038 - 0.6
672,044 - -1.4
672,044 + 0.5
672,045 + -0.6
672,049 + 0.6
672,058 - 0.6
672,139 - 0.5
672,146 + 0.6
672,164 + 0.2
672,165 - 0.1
672,165 - 0.9
672,169 - 1.3
672,175 - 0.1
672,190 - 0.6
672,276 + 1.6
672,293 - -0.9
672,309 + 0.6
672,320 - -0.1
672,331 + 0.6
672,336 - 1.3
672,357 + 0.0
672,360 + 1.2
672,363 + -0.8
672,372 - -0.4
672,375 + 1.1
672,376 - 0.6
672,379 + 0.6
672,379 + -1.0
672,386 + 1.5
672,395 + 0.4
672,399 + 1.4
672,403 - 0.2
672,430 - 0.9
672,479 + -0.0
672,506 - -0.1
672,529 - 8650 mRNA_282 0.11 0.6
672,589 + 8650 mRNA_282 0.19 -0.6
672,699 + 8650 mRNA_282 0.33 0.4
672,774 - 8650 mRNA_282 0.43 -0.1
672,799 + 8650 mRNA_282 0.46 0.4
672,799 - 8650 mRNA_282 0.46 -0.4
672,800 + 8650 mRNA_282 0.46 -0.9
672,805 + 8650 mRNA_282 0.47 0.6
672,821 - 8650 mRNA_282 0.49 -0.4
672,824 - 8650 mRNA_282 0.49 0.8
672,827 + 8650 mRNA_282 0.50 0.9
672,828 + 8650 mRNA_282 0.50 1.2
672,851 + 8650 mRNA_282 0.53 0.2
672,876 - 8650 mRNA_282 0.56 0.2
672,952 - 8650 mRNA_282 0.66 0.1
673,010 + 8650 mRNA_282 0.73 -0.8
673,014 + 8650 mRNA_282 0.74 1.0
673,059 - 8650 mRNA_282 0.80 0.5
673,165 + -0.6
673,215 + 0.3
673,523 + 0.3
673,882 + 0.1