Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_176

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_175: 8543 - KOG2533 Permease of the major facilitator superfamily, at 429470 to 431854 8543 mRNA_176: 8544 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 432530 to 433945 8544 mRNA_177: 8545 - KOG4096 Uncharacterized conserved protein, at 434117 to 434779 8545

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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431,611 + 8543 mRNA_175 0.90 -0.7
431,682 + -0.4
431,765 + 1.0
431,780 - 0.0
431,801 - 0.8
431,802 + 0.5
431,817 - -1.7
431,839 + -1.0
431,942 + 0.3
431,952 - 0.7
431,964 + -0.4
431,969 + -1.2
431,969 - -0.5
431,973 + -0.6
431,974 + 0.3
431,978 - 0.7
431,986 + 0.5
431,988 + -0.3
431,990 + -0.5
431,991 + -0.2
431,991 - -0.3
431,997 + 0.7
432,005 - -0.1
432,005 - 0.2
432,013 + 1.5
432,031 + 1.7
432,044 + -0.7
432,045 + 0.1
432,049 + 0.3
432,049 + 0.6
432,054 + 0.3
432,068 + -0.1
432,070 + -0.3
432,072 - -1.0
432,072 - 0.3
432,073 + 1.3
432,079 + -0.2
432,085 + 0.3
432,089 + -0.7
432,093 + -0.1
432,111 + 0.2
432,150 + -0.4
432,151 + -0.3
432,155 + -0.2
432,160 - -0.6
432,167 + -0.0
432,168 + 0.7
432,174 - -0.1
432,181 - -0.0
432,188 + -0.3
432,191 - -1.5
432,193 - 1.4
432,194 + 0.6
432,197 - 0.2
432,202 + -0.3
432,204 - -1.0
432,209 - -0.7
432,211 - -1.2
432,213 - 0.7
432,222 - -1.9
432,224 + -0.1
432,230 + -0.3
432,231 + 1.9
432,267 - 0.0
432,274 - 0.4
432,290 - 0.5
432,330 - -1.4
432,336 - 0.6
432,336 + 0.1
432,337 + -0.0
432,347 + 2.2
432,351 + -0.2
432,365 - 0.5
432,373 - -0.6
432,378 + 0.2
432,388 + 0.1
432,815 - 8544 mRNA_176 0.20 0.2
432,819 + 8544 mRNA_176 0.20 -0.7
432,830 + 8544 mRNA_176 0.21 -0.3
432,839 - 8544 mRNA_176 0.22 -0.5
433,126 - 8544 mRNA_176 0.42 1.1
434,612 + 8545 mRNA_177 0.75 -0.7
434,620 + 8545 mRNA_177 0.76 1.7
434,733 - -0.8
434,745 - 0.3
434,871 + 0.1
434,885 - -0.4
434,888 + 0.2