Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_73

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_73: 8441 - K00698 CHS1 chitin synthase, at 169827 to 173814 8441 mRNA_74: 8442 - KOG3600 Thyroid hormone receptor-associated protein complex, subunit TRAP240, at 174089 to 180350 8442

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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168,846 + 0.2
168,861 - -0.3
168,864 - -0.4
168,906 + 0.7
168,935 - 0.1
169,155 - -1.0
169,182 - 0.4
169,202 + -0.4
169,356 + -0.1
169,358 - -0.5
169,648 - 1.3
169,668 - -0.4
169,790 - -0.2
169,840 + 1.0
170,219 + 0.2
170,253 - 8441 mRNA_73 0.11 0.0
170,901 - 8441 mRNA_73 0.27 -0.9
171,079 + 8441 mRNA_73 0.31 -0.1
171,383 - 8441 mRNA_73 0.39 2.5
171,551 - 8441 mRNA_73 0.43 -0.5
172,023 - 8441 mRNA_73 0.55 1.1
172,280 - 8441 mRNA_73 0.62 0.1
172,438 - 8441 mRNA_73 0.65 -0.6
172,739 + 8441 mRNA_73 0.73 0.2
172,751 - 8441 mRNA_73 0.73 0.2
172,813 - 8441 mRNA_73 0.75 -0.6
172,962 + 8441 mRNA_73 0.79 0.3
173,174 - 8441 mRNA_73 0.84 0.8
173,424 - 0.4
173,424 + 0.9
173,518 - 0.8
173,553 - 0.4
173,837 + -0.7
173,862 + 0.7
174,086 - -0.5
174,096 - -0.0
174,298 + -0.5
174,298 + -0.0
174,532 + 1.6
174,678 + 1.0