Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_55

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_54: 8422 - KOG1505 Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases, at 128047 to 129356 8422 mRNA_55: 8423 - HMMPfam-Endonuclease/Exonuclease/phosphatase family-PF03372,SUPERFAMILY--SSF56219, at 129465 to 130938 8423 mRNA_56: 8424 - K09499 CCT7 T-complex protein 1 subunit eta, at 131074 to 133280 8424

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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128,484 - 8422 mRNA_54 0.33 0.9
128,488 - 8422 mRNA_54 0.34 0.4
128,618 - 8422 mRNA_54 0.44 1.0
128,981 + 8422 mRNA_54 0.71 0.2
129,214 + 8422 mRNA_54 0.89 0.9
129,267 - 1.0
129,346 - -0.0
129,406 + 0.3
130,359 - 8423 mRNA_55 0.61 -1.7
130,634 - 8423 mRNA_55 0.79 0.5
130,821 + -0.1
130,845 - 1.0
130,982 - 0.3
130,984 - 0.3
130,986 + 1.0
130,986 - 1.0