Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8334

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8333: 16701 - SUPERFAMILY--SSF55781, at 958557 to 960459 16701 mRNA_8334: 16702 - BLAST mtf1_muccl ame full transcription factor mtf1 [Licht..., at 961362 to 964238 16702 mRNA_8335: 16703 - HMMPfam-Shwachman-Bodian-Diamond syndrome (SBDS) protein-PF01172,SUPERFAMILY--SSF89895, at 964932 to 965872 16703

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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960,446 + -0.5
960,569 - -1.3
960,577 + -0.7
960,597 - -0.6
960,611 - 1.2
960,616 + 0.8
960,706 + 0.7
960,753 + 0.2
960,755 + 2.1
960,757 + -0.7
960,767 - -0.4
960,767 + -0.8
960,768 + -0.4
960,774 + -0.4
960,774 + 0.4
960,775 + -2.4
960,777 - 1.7
960,780 + -0.7
960,784 - 0.5
960,784 - 0.1
960,785 + 0.3
960,785 + 0.1
960,787 - 0.9
960,795 - 0.4
960,796 + -2.4
960,797 - -1.5
960,801 + 0.0
960,802 + -1.9
960,805 + -0.8
960,805 + -0.3
960,810 + 0.4
960,811 - -0.5
960,813 - -1.1
960,822 + 1.7
960,825 + 0.8
960,834 - 0.6
960,836 + 2.0
960,847 + 0.0
960,852 - 0.4
960,861 - -0.2
960,868 - 0.3
960,870 - -0.2
960,872 - -0.1
960,873 - -0.1
960,887 + 0.6
960,919 - 0.1
960,922 + -1.0
960,925 - 1.4
960,927 - -0.3
960,930 + 0.4
960,933 + 0.5
960,935 - 0.7
960,938 - -0.3
960,939 + -1.4
960,948 + -2.2
960,949 + -0.2
960,952 - 0.1
960,952 - -1.4
960,953 + 0.2
960,955 + 0.8
960,955 - 0.1
960,957 + 0.2
960,989 + -1.0
960,999 + -1.3
961,027 + 0.8
961,042 - -1.4
961,064 - -0.5
961,211 + 0.4
961,257 - -1.2
961,333 - -0.9
961,530 + 0.0
961,720 - 16702 mRNA_8334 0.12 0.7
961,912 - 16702 mRNA_8334 0.19 -0.5
962,378 + 16702 mRNA_8334 0.35 0.3
962,517 - 16702 mRNA_8334 0.40 0.7
962,523 - 16702 mRNA_8334 0.40 0.9
962,665 - 16702 mRNA_8334 0.45 0.5
962,847 - 16702 mRNA_8334 0.52 0.6
963,248 - 16702 mRNA_8334 0.66 0.5
963,249 - 16702 mRNA_8334 0.66 0.5
963,708 + 16702 mRNA_8334 0.82 0.2
963,819 + 16702 mRNA_8334 0.85 0.2
963,982 + 0.5
964,148 - 0.7
964,156 - 0.2
964,248 + 0.7
964,264 + 0.1
964,279 - 1.3
964,316 - 0.0
964,425 - 0.3
964,430 - -1.0
964,447 - -0.6
964,449 - 0.0
964,455 - 0.2
964,458 - 1.0
964,598 - -0.2
964,599 - 0.2
964,600 - -1.2
964,601 - -1.4
964,606 - 0.3
964,606 - 0.1
964,608 - 0.2
964,612 - 0.3
964,616 + 1.2
964,617 + -0.2
964,618 + -0.5
964,634 + 1.0
964,786 - -0.9
964,796 + 0.0
964,798 + 0.5
964,840 - 0.4
964,840 - 0.5
964,846 + 0.9
964,850 + -0.3
964,855 + 0.3
964,856 + -0.4
964,865 - 0.1
964,866 + 1.6
964,866 + 0.4
964,870 + -0.2
964,875 - 0.6
964,877 - -0.9
964,887 + 0.3
965,048 - 16703 mRNA_8335 0.12 -0.6
965,135 - 16703 mRNA_8335 0.22 -0.2
965,147 - 16703 mRNA_8335 0.23 0.8
965,151 - 16703 mRNA_8335 0.23 -1.3
965,156 + 16703 mRNA_8335 0.24 -0.0
965,178 - 16703 mRNA_8335 0.26 0.5