Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8191

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8190: 16558 - KOG2757 Mannose-6-phosphate isomerase, at 631383 to 634543 16558 mRNA_8191: 16559 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 634694 to 637536 16559 mRNA_8192: 16560 - K12780 REC8 meiotic recombination protein REC8, fungi type, at 637795 to 641120 16560

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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634,037 - 16558 mRNA_8190 0.84 -0.2
634,375 - 1.0
634,622 - 0.4
634,625 + -0.1
634,631 + 0.3
634,636 + -0.1
634,659 - -0.0
634,671 + 1.0
634,679 + 0.1
634,755 + -0.2
634,795 + 0.6
634,800 + -0.1
634,962 + 0.1
635,069 - 16559 mRNA_8191 0.13 0.9
635,086 - 16559 mRNA_8191 0.14 1.5
635,245 - 16559 mRNA_8191 0.19 0.2
635,382 + 16559 mRNA_8191 0.24 0.4
635,827 + 16559 mRNA_8191 0.40 -0.8
635,833 + 16559 mRNA_8191 0.40 -0.2
635,955 + 16559 mRNA_8191 0.44 -0.6
636,104 - 16559 mRNA_8191 0.50 -0.4
636,850 - 16559 mRNA_8191 0.76 -0.5
637,324 + 0.7
637,456 - -0.5