Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8156

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8155: 16523 - K15361 WDR48, UAF1 WD repeat-containing protein 48, at 541110 to 545271 16523 mRNA_8156: 16524 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 545872 to 548769 16524 mRNA_8157: 16525 - ProSiteProfiles-DOMON domain profile.-PS50836,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665,SUPERFAMILY--SSF49344, at 549657 to 551853 16525

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
544,872 - -1.9
544,880 + -1.0
545,039 - -1.0
545,180 - -0.5
545,342 + -0.5
545,459 + 0.7
545,470 + 0.4
545,490 - -0.1
545,649 - -0.2
545,710 + 0.3
545,778 - -0.7
545,784 - 0.1
545,786 - -0.2
545,905 + -0.0
546,099 + -4.2
546,251 + 16524 mRNA_8156 0.13 -0.2
546,502 + 16524 mRNA_8156 0.22 -0.2
546,943 + 16524 mRNA_8156 0.37 -0.4
547,110 + 16524 mRNA_8156 0.43 0.1
547,129 - 16524 mRNA_8156 0.43 -0.9
547,146 - 16524 mRNA_8156 0.44 1.2
547,175 - 16524 mRNA_8156 0.45 -1.6
547,216 - 16524 mRNA_8156 0.46 -1.8
547,394 - 16524 mRNA_8156 0.53 -0.3
547,486 - 16524 mRNA_8156 0.56 -1.2
547,536 - 16524 mRNA_8156 0.57 -3.3
547,579 - 16524 mRNA_8156 0.59 0.1
547,681 + 16524 mRNA_8156 0.62 -0.8
547,724 + 16524 mRNA_8156 0.64 -0.2
548,131 - 16524 mRNA_8156 0.78 -2.2
548,244 - 16524 mRNA_8156 0.82 -0.1
548,527 + -0.2
548,561 + -0.5
548,562 - -0.8
548,581 + 0.2
548,630 - 0.1
548,792 - -0.3
548,801 + -0.7
548,823 + 0.2
548,843 - -0.2
548,846 - -1.5
548,847 - -0.6
548,850 + -1.3
548,860 + 0.3
548,863 + -0.5
548,865 + 0.6
548,940 - -0.1
548,961 - -0.2
548,963 - -0.5
548,964 - -2.3
548,966 + 0.1
548,973 - 0.7
548,974 - -0.3
548,987 + -0.1
548,990 + -0.3
548,992 + -0.8
548,995 - -0.2
549,025 - -0.4
549,025 - -1.5
549,027 + -0.5
549,029 - -0.4
549,030 - -1.0
549,036 + -0.3
549,044 + -1.3
549,045 + -0.7
549,059 - -2.0
549,064 + -0.3
549,064 + -0.9
549,108 + -1.3
549,109 + -1.6
549,109 - -0.3
549,140 - -0.3
549,143 - -0.9
549,207 + 1.4
549,230 + -0.1
549,275 + 0.1
549,276 + -0.5
549,285 + -0.3
549,286 - -0.4
549,287 - -1.3
549,291 - 0.1
549,293 - -2.5
549,293 - -1.5
549,297 - -0.1
549,298 - -0.2
549,299 + -2.7
549,299 - -0.1
549,300 + -0.6
549,302 - -1.7
549,314 - -0.7
549,323 + -1.3
549,324 + -0.6
549,332 - -0.3
549,333 - -1.2
549,333 - -0.3
549,334 + 0.6
549,335 + 0.8
549,341 + -0.4
549,346 + -2.1
549,349 + -0.2
549,361 + -1.1
549,364 + -0.4
549,364 - -0.4
549,405 - -0.5
549,406 + -1.0
549,419 - -0.8
549,423 - -0.4
549,424 + -0.1
549,424 - -0.4
549,426 + -1.1
549,429 - -0.4
549,430 - 1.0
549,435 + -0.4
549,435 - -1.0
549,440 + -1.0
549,441 + -2.2
549,469 + -1.0
549,482 - -0.1
549,566 - -0.7
549,576 - -0.3
549,595 + -0.8
549,597 - 0.2
549,598 + -2.4
549,610 - -1.3
549,616 + -1.6
549,619 + -2.0
549,624 + -0.2
549,625 - 0.4
549,634 + -1.3
549,642 - -0.1
549,645 + -0.4
549,654 + 0.0
549,659 - -1.3
549,672 - 0.1
549,682 - -0.9
549,685 - 0.1
549,686 + -0.1
549,687 - -1.0
549,689 + -0.1
549,692 + -0.4
549,700 - -1.9
549,701 + -0.3
549,713 + -0.8
549,713 + 1.0
549,746 + -0.3
549,754 + 0.6