Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8136

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8135: 16503 - K00804 GGPS1 geranylgeranyl diphosphate synthase, type III, at 500872 to 502376 16503 mRNA_8136: 16504 - KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies, at 502588 to 504412 16504 mRNA_8137: 16505 - K00586 DPH5 diphthine methyl ester synthase, at 505150 to 506230 16505

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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502,307 + 0.2
502,393 - 0.1
502,783 - 16504 mRNA_8136 0.11 -0.1
503,037 - 16504 mRNA_8136 0.25 -0.2
503,176 + 16504 mRNA_8136 0.32 -0.0
503,254 - 16504 mRNA_8136 0.36 -1.1
503,452 - 16504 mRNA_8136 0.47 -0.1
503,904 + 16504 mRNA_8136 0.72 -0.9
503,909 - 16504 mRNA_8136 0.72 -0.4
504,074 + 16504 mRNA_8136 0.81 -2.1
504,375 + 0.6
504,562 + 0.1
504,776 + -0.8
504,955 + -0.5
505,077 - -0.3
505,090 + 0.1
505,221 + -1.1
505,359 + 16505 mRNA_8137 0.19 -1.6