Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8049

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8048: 16416 - Hypothetical Protein, at 299465 to 299980 16416 mRNA_8049: 16417 - SUPERFAMILY--SSF52047, at 300681 to 303799 16417 mRNA_8050: 16418 - K02943 RP-LP2, RPLP2 large subunit ribosomal protein LP2, at 304336 to 304986 16418

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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299,950 - 0.1
300,232 - -0.7
300,348 - 1.8
300,564 - 0.2
301,299 + 16417 mRNA_8049 0.20 0.2
301,318 + 16417 mRNA_8049 0.20 0.3
301,449 + 16417 mRNA_8049 0.25 -0.6
301,486 + 16417 mRNA_8049 0.26 -0.1
301,495 + 16417 mRNA_8049 0.26 -1.3
301,578 - 16417 mRNA_8049 0.29 0.1
301,751 - 16417 mRNA_8049 0.34 -0.6
301,764 + 16417 mRNA_8049 0.35 2.9
301,778 + 16417 mRNA_8049 0.35 -0.0
301,885 - 16417 mRNA_8049 0.39 0.3
301,889 + 16417 mRNA_8049 0.39 0.1
301,897 + 16417 mRNA_8049 0.39 -0.8
302,196 - 16417 mRNA_8049 0.49 -1.8
302,231 + 16417 mRNA_8049 0.50 1.2
302,369 + 16417 mRNA_8049 0.54 -1.9
302,506 - 16417 mRNA_8049 0.59 1.1
302,651 + 16417 mRNA_8049 0.63 1.1
302,779 - 16417 mRNA_8049 0.67 0.7
302,978 + 16417 mRNA_8049 0.74 -0.6
303,522 + 0.1
303,535 + 0.4
303,662 - -0.4
303,719 + -0.3
303,831 - -0.6
303,969 - 0.3
303,971 - 0.3
304,027 - 1.7
304,044 + -1.0
304,080 - 0.2
304,121 + 0.0
304,125 + 0.7
304,294 + 0.6