Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7988

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7987: 16355 - SUPERFAMILY--SSF144232, at 155023 to 156185 16355 mRNA_7988: 16356 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 156478 to 157308 16356 mRNA_7989: 16357 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 157953 to 158694 16357

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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155,478 - 16355 mRNA_7987 0.39 0.5
155,499 - 16355 mRNA_7987 0.41 -0.4
155,526 - 16355 mRNA_7987 0.43 -1.2
155,535 + 16355 mRNA_7987 0.44 -0.0
155,540 + 16355 mRNA_7987 0.44 0.4
155,641 + 16355 mRNA_7987 0.53 0.3
155,812 + 16355 mRNA_7987 0.68 0.2
155,825 + 16355 mRNA_7987 0.69 0.6
155,833 + 16355 mRNA_7987 0.70 0.1
155,838 - 16355 mRNA_7987 0.70 0.3
155,974 + 16355 mRNA_7987 0.82 -0.4
155,996 - 16355 mRNA_7987 0.84 0.4
156,106 - -0.3
156,110 + 0.2
156,116 - 0.1
156,162 + 0.2
156,186 + 0.7
156,255 + 0.1
156,259 + 0.8
156,278 + -0.2
156,280 + 0.4
156,281 - -1.2
156,282 + -1.1
156,293 + -0.9
156,294 + -0.2
156,312 + 0.0
156,420 - -0.3
156,683 - 16356 mRNA_7988 0.25 1.0
156,712 + 16356 mRNA_7988 0.28 -1.1
156,723 - 16356 mRNA_7988 0.29 0.2
156,803 + 16356 mRNA_7988 0.39 0.2
156,850 - 16356 mRNA_7988 0.45 0.2
157,027 + 16356 mRNA_7988 0.66 0.5
157,027 + 16356 mRNA_7988 0.66 -0.9
157,302 + 0.6
157,413 - -1.6
157,439 + -1.4
157,441 - -0.7
157,863 + 0.6
158,048 + 16357 mRNA_7989 0.13 -1.1
158,202 - 16357 mRNA_7989 0.34 -1.2
158,204 + 16357 mRNA_7989 0.34 -1.6
158,281 + 16357 mRNA_7989 0.44 0.8