Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7955

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7954: 16322 - K01282 E3.4.14.- dipeptidyl aminopeptidase, at 88821 to 92965 16322 mRNA_7955: 16323 - K00128 ALDH aldehyde dehydrogenase (NAD+), at 93400 to 95869 16323 mRNA_7956: 16324 - K03146 THI4, THI1 thiamine thiazole synthase, at 96703 to 99029 16324

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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92,797 + -0.2
92,979 - 0.6
93,326 + 0.3
93,335 - 0.2
93,338 + 0.7
93,342 - 1.1
93,347 + 1.7
93,348 - 0.3
93,349 + 0.6
93,349 + 0.5
93,524 - 0.6
93,893 - 16323 mRNA_7955 0.20 2.7
93,956 - 16323 mRNA_7955 0.23 0.2
94,283 - 16323 mRNA_7955 0.36 -0.1
94,373 - 16323 mRNA_7955 0.39 0.1
94,382 - 16323 mRNA_7955 0.40 0.9
94,430 - 16323 mRNA_7955 0.42 0.4
94,691 - 16323 mRNA_7955 0.52 0.3
95,123 - 16323 mRNA_7955 0.70 -0.2
95,165 - 16323 mRNA_7955 0.71 -0.2
95,254 - 16323 mRNA_7955 0.75 0.0
95,257 + 16323 mRNA_7955 0.75 -1.6
95,534 - 16323 mRNA_7955 0.86 -0.1
95,573 + 16323 mRNA_7955 0.88 -0.5
95,841 - 1.1
95,858 - 0.4
96,009 - -0.4
96,072 - 1.6
96,083 + -0.7
96,179 + 0.1
96,285 - -0.0
96,298 + 0.3
96,473 + -0.5
96,497 + 0.8
96,513 + -1.7
96,533 - -1.6
96,538 + 0.7
96,554 - 0.6
96,567 - 0.2
96,574 + -0.2
96,580 - -0.5
96,590 - -0.1
96,605 + -1.3
96,616 + 0.5
96,631 + -2.0
96,633 - 0.0
96,641 - 0.3