Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7915

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7915: 16283 - SUPERFAMILY--SSF51445, at 12129 to 14300 16283 mRNA_7916: 16284 - K08683 HSD17B10 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase, at 14684 to 15975 16284

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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11,145 + 1.3
11,292 - 0.3
11,303 - 1.3
11,307 - -0.3
11,309 - 0.3
11,310 + -0.7
11,314 + 0.0
11,323 + 0.3
11,342 - -0.9
11,431 + 0.7
11,437 - 0.1
11,461 - 0.1
11,465 - -0.1
11,475 + 0.2
11,482 - 0.9
11,482 - 0.3
11,483 + 0.3
11,484 + 1.1
11,486 - 0.8
11,486 - 0.6
11,486 - 0.1
11,487 - 0.8
11,489 - 0.3
11,494 + -0.8
11,494 - 0.2
11,495 + -0.8
11,497 + 0.6
11,500 - 0.5
11,501 - 1.0
11,503 - 1.1
11,503 - 0.2
11,503 - -0.3
11,505 - 0.8
11,506 + -0.0
11,506 + 0.4
11,506 + -0.2
11,512 + -0.1
11,513 - -0.3
11,513 - -1.7
11,524 - 1.5
11,525 - 0.7
11,527 + -0.5
11,527 - 0.8
11,529 - 0.2
11,529 - 0.4
11,530 - 1.1
11,530 + 0.7
11,532 + 0.1
11,540 + 1.2
11,547 + -0.2
11,549 + -0.6
11,557 + -0.2
11,557 + -0.0
11,557 + -0.1
11,561 - -2.1
11,573 - -0.5
11,586 - 0.0
11,589 + 0.2
11,591 + -0.6
11,596 + -0.2
11,609 + 0.6
11,620 + 0.5
11,646 - -0.0
11,649 - -0.3
11,651 - 0.3
11,654 + 0.6
11,656 - 1.1
11,671 - -0.5
11,674 + 1.3
11,676 + -0.8
11,680 + 0.2
11,684 + 0.2
11,684 - 0.9
11,696 - -1.7
11,696 + 0.1
11,704 - 1.2
11,709 - -1.4
11,709 - -0.3
11,710 + -1.6
11,710 + -0.7
11,715 - 2.1
11,721 + 1.0
11,724 - 0.3
11,724 - 0.2
11,734 - -0.2
11,755 - -1.4
11,766 + 0.2
11,767 + -2.2
11,768 - 0.7
11,778 - 0.6
11,779 + -1.4
11,792 - -0.0
11,904 + 0.3
11,915 + -1.2
11,922 + 1.4
11,923 - 0.2
11,931 + 0.0
11,938 - -0.4
12,072 + -0.4
12,180 + 0.1
12,330 - -0.1
12,410 - 16283 mRNA_7915 0.13 -0.5
12,645 - 16283 mRNA_7915 0.24 0.1
12,767 - 16283 mRNA_7915 0.29 0.2
12,784 + 16283 mRNA_7915 0.30 0.3
13,198 - 16283 mRNA_7915 0.49 -1.0
13,417 + 16283 mRNA_7915 0.59 0.2
13,504 - 16283 mRNA_7915 0.63 -0.6
13,509 + 16283 mRNA_7915 0.64 -1.1
13,533 + 16283 mRNA_7915 0.65 0.2
13,950 - 16283 mRNA_7915 0.84 0.5
13,953 + 16283 mRNA_7915 0.84 -1.9
14,353 - -0.1
14,370 - -0.5
14,410 + 0.5
14,532 - 0.1
14,689 + -0.2
14,696 - -0.1
14,836 - 16284 mRNA_7916 0.12 -0.4
14,843 + 16284 mRNA_7916 0.12 -2.5