Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7908

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7907: 16275 - K14951 ATP13A3_4_5 cation-transporting ATPase 13A3/4/5, at 1348898 to 1356379 16275 mRNA_7908: 16276 - K03783 punA, PNP purine-nucleoside phosphorylase, at 1357021 to 1359036 16276 mRNA_7909: 16277 - Hypothetical Protein, at 1359172 to 1360020 16277

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,356,376 - 1.2
1,356,422 + 0.8
1,356,501 - 1.0
1,356,521 + -0.6
1,356,522 - -1.6
1,356,668 + -1.3
1,356,775 - -0.8
1,356,775 - -0.8
1,356,814 + 0.5
1,356,823 - -1.2
1,356,925 - 1.3
1,356,925 - 0.7
1,356,926 + 3.5
1,356,964 + 0.2
1,357,096 + 0.5
1,357,117 - -4.6
1,357,252 - 16276 mRNA_7908 0.11 1.5
1,357,257 - 16276 mRNA_7908 0.12 0.8
1,357,258 + 16276 mRNA_7908 0.12 0.2
1,357,401 - 16276 mRNA_7908 0.19 -0.6
1,357,404 - 16276 mRNA_7908 0.19 0.5
1,357,406 + 16276 mRNA_7908 0.19 0.4
1,357,414 + 16276 mRNA_7908 0.19 0.5
1,357,414 + 16276 mRNA_7908 0.19 -0.3
1,357,589 + 16276 mRNA_7908 0.28 -0.4
1,357,697 - 16276 mRNA_7908 0.34 0.2
1,357,849 - 16276 mRNA_7908 0.41 -1.6
1,357,887 - 16276 mRNA_7908 0.43 -1.5
1,357,979 - 16276 mRNA_7908 0.48 -1.0
1,358,022 + 16276 mRNA_7908 0.50 -1.0
1,358,055 - 16276 mRNA_7908 0.51 1.5
1,358,144 - 16276 mRNA_7908 0.56 -1.0
1,358,431 - 16276 mRNA_7908 0.70 -2.6
1,358,557 + 16276 mRNA_7908 0.76 0.1
1,358,560 - 16276 mRNA_7908 0.76 -1.9
1,358,560 - 16276 mRNA_7908 0.76 -2.4
1,358,674 - 16276 mRNA_7908 0.82 -0.1
1,358,885 - -0.6
1,358,966 - -1.0
1,358,974 + -2.7
1,359,003 - -1.3
1,359,004 - 0.2
1,359,021 + -0.2
1,359,117 - -0.2
1,359,181 + -0.3
1,359,329 + 16277 mRNA_7909 0.18 -1.4
1,359,439 - 16277 mRNA_7909 0.31 -1.6
1,359,474 - 16277 mRNA_7909 0.36 0.9
1,359,488 - 16277 mRNA_7909 0.37 0.1
1,359,599 - 16277 mRNA_7909 0.50 0.2
1,359,664 - 16277 mRNA_7909 0.58 -1.0
1,359,733 - 16277 mRNA_7909 0.66 0.5
1,359,838 - 16277 mRNA_7909 0.78 0.7
1,359,845 - 16277 mRNA_7909 0.79 -0.9
1,359,846 - 16277 mRNA_7909 0.79 -1.5
1,359,879 - 16277 mRNA_7909 0.83 -1.4
1,359,879 - 16277 mRNA_7909 0.83 0.9
1,359,913 - 16277 mRNA_7909 0.87 -0.9
1,360,033 + 0.9