Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7806

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7805: 16173 - K12389 BTS, CLN3 battenin, at 1113037 to 1115028 16173 mRNA_7806: 16174 - Hypothetical Protein, at 1115383 to 1115856 16174 mRNA_7807: 16175 - K01304 pcp pyroglutamyl-peptidase, at 1116309 to 1117210 16175

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,114,520 - 16173 mRNA_7805 0.74 -1.3
1,114,817 - 16173 mRNA_7805 0.89 -1.8
1,114,939 - 0.5
1,114,939 - 0.7
1,115,061 - -0.2
1,115,094 + 2.5
1,115,140 + 0.1
1,115,142 + -0.3
1,115,151 + 1.2
1,115,152 - 0.3
1,115,154 - 0.9
1,115,154 - -2.7
1,115,155 + -0.1
1,115,158 - 1.5
1,115,176 - 0.6
1,115,202 - 0.8
1,115,295 - -1.4
1,115,451 - 16174 mRNA_7806 0.14 0.0
1,115,471 - 16174 mRNA_7806 0.19 -0.0
1,115,745 + 16174 mRNA_7806 0.76 -0.7
1,115,773 + 16174 mRNA_7806 0.82 0.4
1,115,908 - 0.1
1,115,930 - 0.7
1,116,462 - 16175 mRNA_7807 0.17 0.6
1,116,512 - 16175 mRNA_7807 0.23 -0.4
1,116,686 - 16175 mRNA_7807 0.42 0.5
1,116,847 + 16175 mRNA_7807 0.60 -0.3