Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7726

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7725: 16093 - Hypothetical Protein, at 933861 to 936370 16093 mRNA_7726: 16094 - KOG1231 Proteins containing the FAD binding domain, at 937355 to 939752 16094 mRNA_7727: 16095 - K13354 SLC25A17, PMP34 solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17, at 940127 to 941686 16095

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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936,665 - 0.3
936,669 + 1.1
936,675 - 1.2
936,718 + -0.6
936,718 - 1.3
936,791 + -0.3
936,793 - -0.2
936,795 - 1.9
936,833 - 0.3
936,834 + -1.1
936,948 - 1.2
936,966 - 0.9
936,978 - 0.5
936,987 - -0.5
937,082 + 0.4
937,108 - -0.8
937,111 - 0.7
937,122 - -0.0
937,153 - 0.1
937,257 - -1.9
937,274 - -0.2
937,291 + -0.3
937,312 - 0.6
937,418 - -0.9
937,423 - 0.1
937,536 - 0.3
938,501 + 16094 mRNA_7726 0.48 1.3
938,578 + 16094 mRNA_7726 0.51 -0.1
938,589 + 16094 mRNA_7726 0.51 0.3
938,715 + 16094 mRNA_7726 0.57 -0.3
938,739 - 16094 mRNA_7726 0.58 0.5
939,014 + 16094 mRNA_7726 0.69 0.9
939,135 + 16094 mRNA_7726 0.74 -0.2
939,734 - 0.9
939,884 - 0.2
939,891 - -0.1
939,909 - -1.8
939,909 + -0.8
939,937 + -0.6
939,959 - 1.1
940,191 - -0.7
940,220 + 0.3
940,266 + -1.4
940,268 - -0.9
940,510 - 16095 mRNA_7727 0.25 -0.6
940,531 + 16095 mRNA_7727 0.26 1.0
940,536 - 16095 mRNA_7727 0.26 -0.3
940,544 + 16095 mRNA_7727 0.27 0.3