Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7623

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7623: 15991 - K19564 CTR, HNM1 choline transport protein, at 704159 to 706103 15991 mRNA_7624: 15992 - KOG1535 Predicted fumarylacetoacetate hydralase, at 706730 to 707973 15992

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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703,178 - 0.2
703,385 - 0.3
703,397 + 0.3
703,668 - 0.6
703,689 + -0.0
703,969 + 0.2
703,991 + 1.0
703,994 + 0.1
703,996 + 1.0
704,126 - 0.6
704,135 + 1.1
704,154 + 0.3
704,442 + 15991 mRNA_7623 0.15 -1.0
704,618 + 15991 mRNA_7623 0.24 -0.1
704,861 - 15991 mRNA_7623 0.36 0.9
705,005 + 15991 mRNA_7623 0.43 0.4
705,259 - 15991 mRNA_7623 0.57 0.2
705,440 + 15991 mRNA_7623 0.66 -0.1
705,452 - 15991 mRNA_7623 0.66 0.5
705,994 - 0.9
706,018 - -0.4
706,023 + -0.9
706,024 - 0.3
706,308 - -0.3
706,311 - 0.9
706,332 - 0.2
706,456 - 0.2
706,470 + 0.4
706,476 + 0.3
706,479 - 1.0
706,481 - 0.9
706,617 - 0.4
706,631 - 0.9
706,789 + 1.0
706,813 - 0.2
706,966 + 15992 mRNA_7624 0.19 0.3