Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7581

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7580: 15948 - KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins, at 609831 to 611279 15948 mRNA_7581: 15949 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 611690 to 614027 15949 mRNA_7582: 15950 - KOG2534 DNA polymerase IV (family X), at 614883 to 616136 15950

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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611,323 - 1.2
611,326 + 0.7
611,338 + 1.2
611,344 - -0.2
611,346 - 0.5
611,347 + -0.6
611,355 - -0.7
611,355 + -0.5
611,355 + -0.5
611,357 - -0.1
611,363 + 0.3
611,363 + 0.3
611,364 + 0.0
611,498 - 0.2
611,660 + 0.5
611,928 + 15949 mRNA_7581 0.10 2.0
611,955 + 15949 mRNA_7581 0.11 -0.1
612,337 - 15949 mRNA_7581 0.28 0.6
612,546 - 15949 mRNA_7581 0.37 0.2
612,681 + 15949 mRNA_7581 0.42 -0.8
612,710 - 15949 mRNA_7581 0.44 -0.4
613,109 - 15949 mRNA_7581 0.61 1.3
613,145 + 15949 mRNA_7581 0.62 -0.0
613,449 - 15949 mRNA_7581 0.75 0.8
613,828 - 0.3
614,145 - -0.8
614,164 + -1.3
614,309 - 0.3
614,575 + -2.3
614,666 + -0.9
614,915 + 0.5