Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7548

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7547: 15915 - Hypothetical Protein, at 534942 to 536762 15915 mRNA_7548: 15916 - K08023 LTBP2_3_4 latent transforming growth factor beta binding protein 2/3/4, at 537029 to 539584 15916

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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536,312 + 15915 mRNA_7547 0.75 -0.5
536,336 - 15915 mRNA_7547 0.77 0.3
536,342 + 15915 mRNA_7547 0.77 2.1
536,434 - 15915 mRNA_7547 0.82 0.3
536,712 - 0.4
536,784 - 0.2
536,793 + 0.1
536,885 - 0.5
536,930 + 0.1
537,063 + 0.8
537,338 - 15916 mRNA_7548 0.12 -1.8
537,378 + 15916 mRNA_7548 0.14 -1.9
537,470 + 15916 mRNA_7548 0.17 -0.3
537,957 + 15916 mRNA_7548 0.36 -0.8
538,048 - 15916 mRNA_7548 0.40 0.3
538,178 - 15916 mRNA_7548 0.45 -0.8
538,196 + 15916 mRNA_7548 0.46 2.0
538,345 - 15916 mRNA_7548 0.51 0.0
538,638 - 15916 mRNA_7548 0.63 1.2
538,883 - 15916 mRNA_7548 0.73 -0.9
539,056 + 15916 mRNA_7548 0.79 2.5
539,103 - 15916 mRNA_7548 0.81 0.8
539,109 - 15916 mRNA_7548 0.81 0.6
539,216 + 15916 mRNA_7548 0.86 0.3
539,243 + 15916 mRNA_7548 0.87 0.0
539,350 + 0.6
539,387 + 1.1
539,545 - 0.4
539,557 + 0.2
539,642 - 1.8
539,644 - 0.8
539,654 - 1.1
539,659 - 0.1
539,661 - 0.0
539,677 + 0.1
539,696 - 0.4
539,762 - 1.0
539,772 - 0.7
539,774 - 0.5
539,782 - 0.4
539,788 + 0.5
539,796 - -1.1
539,802 - -0.0
539,802 - 0.4
539,803 - 1.0
539,803 - 0.4
539,806 + -0.2
539,815 + 0.5
539,821 - 0.3
539,821 + 0.4
539,823 + 0.7
539,826 - 0.6
539,828 - -1.1
539,833 + 0.2
539,839 + 1.1
539,839 - 0.8
539,848 - -0.5
539,849 - 0.4
539,849 - -1.9
539,850 - -0.1
539,850 + 1.0
539,851 - -0.8
539,852 - 0.6
539,865 + 0.5
539,872 + -0.1
539,874 - -0.4
539,876 + -0.5
539,877 - -0.2
539,898 + 0.6
539,963 - -0.2
539,966 - -0.4
539,971 - 0.9
539,981 + 0.5
539,994 + 0.5
539,998 - 0.1
539,999 - -0.3
540,000 - -1.0
540,003 - 0.1
540,004 + 0.8
540,004 + 1.4
540,005 - 0.6
540,006 - 0.2
540,006 + 0.4
540,006 + -0.6
540,006 + 2.0
540,008 + 0.3
540,012 + 0.6
540,015 - -0.1
540,016 + 1.1
540,016 + -0.2
540,016 + -0.5
540,022 + -1.2
540,023 + 0.2
540,027 + 0.4
540,027 + -0.6
540,028 - 1.5
540,029 + 0.2
540,038 + 0.1
540,060 - -0.1
540,061 - 0.2
540,061 - 0.4
540,063 + 0.2
540,068 - 0.2
540,072 - 0.7
540,076 + 1.0
540,081 - 0.4
540,084 + 0.7
540,085 - -1.0
540,092 - -0.9
540,094 - 0.6
540,098 - 0.7
540,102 + -0.2
540,109 + -0.7
540,118 + -0.2
540,150 - 0.5
540,152 + 0.5
540,154 - -0.4
540,156 - -1.0
540,157 - 0.3
540,158 - -0.6
540,160 + -1.4
540,160 + 0.2
540,160 + 0.3
540,161 - -0.3
540,163 + -0.5
540,168 - 0.1
540,169 - -0.6
540,173 - -0.3
540,173 - 2.3
540,173 - 0.8
540,174 - 0.2
540,178 + 0.7
540,178 + -0.5
540,179 - 2.6
540,180 + -0.8
540,194 + -1.6
540,194 + 0.2
540,200 - -0.5
540,210 + -0.2
540,217 + 0.5
540,234 + -0.7
540,236 + -0.1
540,239 - 0.8
540,246 - -0.1
540,248 + 0.9
540,251 - -0.1
540,252 + -0.7
540,256 - 0.9
540,264 + 1.6
540,266 - 0.7
540,269 - 0.2
540,270 + -1.2
540,274 - 0.0
540,283 - -0.0
540,286 + 0.4
540,288 + -2.3
540,289 + 0.6
540,295 - 0.8
540,297 - -0.1
540,390 + 0.1
540,406 - -1.6
540,411 - 0.1
540,432 + 0.4
540,441 + 1.0
540,446 - 0.8
540,448 - 0.1
540,451 + 0.5
540,565 - 1.0
540,576 - -0.1