Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7428

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7428: 15796 - Interpro XLF-Cernunnos, XRcc4-like factor, NHEJ component, at 251137 to 252658 15796 mRNA_7429: 15797 - KOG0254 Predicted transporter (major facilitator superfamily), at 252711 to 255477 15797

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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250,193 + 0.1
250,239 - 0.3
250,361 + -1.2
250,414 + 0.5
250,504 - -0.3
250,528 - -0.1
250,587 + 0.6
250,694 + -1.8
250,710 + 0.6
250,745 - -0.1
250,782 + -0.0
250,806 - 0.7
250,838 + 0.0
250,838 - 1.0
250,854 + -0.8
250,957 - -0.5
250,958 - 0.1
250,963 + 0.5
250,964 + 0.2
250,973 + 0.2
250,983 + 0.3
251,103 + -0.3
251,291 - 15796 mRNA_7428 0.10 0.0
252,155 - 15796 mRNA_7428 0.67 -0.9
252,169 + 15796 mRNA_7428 0.68 -1.0
252,622 + -0.5
252,895 + -0.9
253,018 - 15797 mRNA_7429 0.11 0.9
253,050 - 15797 mRNA_7429 0.12 0.3
253,513 - 15797 mRNA_7429 0.29 0.1