Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7257

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7256: 15624 - BLAST protein kinase-like domain containing protein [Rh..., at 1231458 to 1233472 15624 mRNA_7257: 15625 - ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 1233566 to 1236513 15625 mRNA_7258: 15626 - K11378 SAS3 histone acetyltransferase SAS3, at 1237198 to 1241619 15626

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,232,655 - 15624 mRNA_7256 0.59 -1.1
1,232,939 - 15624 mRNA_7256 0.73 0.8
1,232,957 - 15624 mRNA_7256 0.74 -2.2
1,233,295 - 1.7
1,233,446 - 1.7
1,233,447 - 0.4
1,233,503 - 0.3
1,233,558 + 1.7
1,233,800 + 0.2
1,233,846 - -1.8
1,234,023 + 15625 mRNA_7257 0.16 0.6
1,234,176 - 15625 mRNA_7257 0.21 -0.3
1,234,283 + 15625 mRNA_7257 0.24 0.2
1,234,336 - 15625 mRNA_7257 0.26 1.4
1,234,407 + 15625 mRNA_7257 0.29 0.8
1,234,415 - 15625 mRNA_7257 0.29 0.5
1,234,416 + 15625 mRNA_7257 0.29 -0.4
1,234,690 - 15625 mRNA_7257 0.38 1.5
1,234,948 - 15625 mRNA_7257 0.47 -0.5
1,235,268 + 15625 mRNA_7257 0.58 -0.2
1,235,575 + 15625 mRNA_7257 0.68 -1.0
1,235,587 - 15625 mRNA_7257 0.69 0.9
1,235,678 + 15625 mRNA_7257 0.72 0.3
1,235,987 + 15625 mRNA_7257 0.82 -0.3
1,236,024 + 15625 mRNA_7257 0.83 0.4
1,236,131 - 15625 mRNA_7257 0.87 -0.9
1,236,317 - 0.5
1,236,379 - 0.4
1,236,567 + 0.3
1,236,586 + -1.0
1,236,878 - -0.1
1,237,168 - 0.2
1,237,246 - -0.3
1,237,325 + 0.7
1,237,414 - -0.1