Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7172

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7171: 15539 - Hypothetical Protein, at 1043554 to 1044696 15539 mRNA_7172: 15540 - K01408 IDE, ide insulysin, at 1045325 to 1049371 15540 mRNA_7173: 15541 - K02891 RP-L22e, RPL22 large subunit ribosomal protein L22e, at 1049692 to 1050738 15541

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,044,329 - 15539 mRNA_7171 0.68 -0.7
1,044,362 - 15539 mRNA_7171 0.71 -0.1
1,044,775 - 0.2
1,044,786 + 0.3
1,044,791 - 0.2
1,044,804 + -1.0
1,044,913 - 0.5
1,044,919 - 0.4
1,044,920 + -0.5
1,044,928 - -1.4
1,044,936 + -1.1
1,044,946 + 0.9
1,044,960 + -0.9
1,045,077 - -0.5
1,045,083 - -1.4
1,045,085 + 1.0
1,045,096 - 0.5
1,045,118 - -0.3
1,045,119 + -1.0
1,045,119 + -0.8
1,045,125 + 1.0
1,045,235 + 1.2
1,045,262 + 0.3
1,045,262 - 0.4
1,045,280 + 0.8
1,045,396 + -1.2
1,045,403 - -1.5
1,045,420 + 0.1
1,045,425 - 0.2
1,045,679 - -0.2
1,045,821 - 15540 mRNA_7172 0.12 0.1
1,046,405 - 15540 mRNA_7172 0.27 -0.8
1,047,143 + 15540 mRNA_7172 0.45 -0.2
1,047,424 + 15540 mRNA_7172 0.52 0.4
1,047,744 + 15540 mRNA_7172 0.60 0.9
1,047,984 - 15540 mRNA_7172 0.66 0.3
1,047,991 + 15540 mRNA_7172 0.66 0.4
1,048,008 + 15540 mRNA_7172 0.66 0.3
1,048,278 + 15540 mRNA_7172 0.73 -1.1
1,048,432 - 15540 mRNA_7172 0.77 0.7
1,048,526 - 15540 mRNA_7172 0.79 -0.2
1,048,704 + 15540 mRNA_7172 0.83 -0.8
1,048,819 - 15540 mRNA_7172 0.86 0.3
1,048,859 - 15540 mRNA_7172 0.87 -0.2
1,049,147 + 0.1
1,049,285 - 0.5
1,049,458 + -0.4
1,049,459 + 0.2
1,049,478 - -1.1