Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7126

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7126: 15494 - K15122 SLC41A solute carrier family 41, at 939569 to 941230 15494 mRNA_7127: 15495 - BLAST adenylate cyclase-associated protein [Moesziomyces an..., at 941404 to 943862 15495

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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938,691 - 0.0
938,837 - 1.0
938,848 - 2.3
938,849 + 1.8
938,850 + 0.6
938,960 - 0.2
938,977 - 0.6
938,978 + -0.6
938,986 + 0.0
938,989 + -0.6
938,997 + 0.8
939,000 - -0.9
939,003 + -0.1
939,007 + -0.0
939,008 + 0.8
939,008 + 0.3
939,008 - 0.7
939,009 + 0.8
939,011 + 0.7
939,019 + 0.6
939,297 + -0.3
939,441 + 0.4
939,579 + 0.7
939,866 - 15494 mRNA_7126 0.18 1.0
939,868 - 15494 mRNA_7126 0.18 -1.6
940,041 - 15494 mRNA_7126 0.28 0.8
940,741 - 15494 mRNA_7126 0.71 -0.2
940,877 - 15494 mRNA_7126 0.79 1.9
940,891 - 15494 mRNA_7126 0.80 -1.6
941,014 - 15494 mRNA_7126 0.87 -0.3
941,309 - 0.5
941,327 + -1.2
941,328 + 1.4
941,332 - 0.6
941,460 + -0.5
941,460 + -1.1
941,590 + 0.4
941,595 - -0.3
941,602 - -1.5
941,603 + -0.6
941,612 + -0.3
941,729 - 15495 mRNA_7127 0.13 -0.3
941,736 + 15495 mRNA_7127 0.14 0.4
941,766 - 15495 mRNA_7127 0.15 0.8
941,772 + 15495 mRNA_7127 0.15 -1.3
941,775 + 15495 mRNA_7127 0.15 0.2
942,035 + 15495 mRNA_7127 0.26 -0.3
942,049 - 15495 mRNA_7127 0.26 -0.0
942,105 - 15495 mRNA_7127 0.29 0.4
942,179 - 15495 mRNA_7127 0.32 0.2
942,187 - 15495 mRNA_7127 0.32 0.1